RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 BMP2KQ9NSY1 1161 aaPredicted RBP17.6■□□□□ 0.41
ZNF550-207ENST00000595560 MRPL42Q9Y6G3 142 aaKnown RBP17.6■□□□□ 0.41
ZNF550-207ENST00000595560 ASAP2O43150 1006 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 MED24O75448 989 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 MUTP22033 750 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 BMPR1AP36894 532 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 LAMTOR4Q0VGL1 99 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 HAUS3Q68CZ6 603 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 FERMT3Q86UX7 667 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 PIGOQ8TEQ8 1089 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 C11orf84Q9BUA3 381 aaPredicted RBP17.59■□□□□ 0.41
ZNF550-207ENST00000595560 PLVAPQ9BX97 442 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 PRDM6Q9NQX0 595 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.59■□□□□ 0.41
ZNF550-207ENST00000595560 DACT1Q9NYF0 836 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 THEGQ9P2T0 379 aa17.59■□□□□ 0.41
ZNF550-207ENST00000595560 DBR1Q9UK59 544 aaKnown RBP17.59■□□□□ 0.41
ZNF550-207ENST00000595560 BRWD1Q9NSI6 2320 aa17.58■□□□□ 0.41
ZNF550-207ENST00000595560 IBSPP21815 317 aaPredicted RBP17.58■□□□□ 0.4
ZNF550-207ENST00000595560 PRPHP41219 470 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 GATMP50440 423 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 GPM6BQ13491 265 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 PDIA5Q14554 519 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 MXD4Q14582 209 aaPredicted RBP17.58■□□□□ 0.4
ZNF550-207ENST00000595560 PTPROQ16827 1216 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 PAN2Q504Q3 1202 aaKnown RBP17.58■□□□□ 0.4
ZNF550-207ENST00000595560 LARP1BQ659C4 914 aaKnown RBP17.58■□□□□ 0.4
ZNF550-207ENST00000595560 POTEGQ6S5H5 508 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 SRGAP1Q7Z6B7 1085 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 ECHDC2Q86YB7 292 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 IGSF22Q8N9C0 903 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 MRPL38Q96DV4 380 aaKnown RBP17.58■□□□□ 0.4
ZNF550-207ENST00000595560 NACC1Q96RE7 527 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 TRAIPQ9BWF2 469 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 RAB34Q9BZG1 259 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 CUL9Q8IWT3 2517 aa17.58■□□□□ 0.4
ZNF550-207ENST00000595560 XIRP2A4UGR9 3374 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 VCANP13611 3396 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 A0A0U1RQF3 1178 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 HOXA2O43364 376 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 SRGAP2CP0DJJ0 459 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 FGFR1P11362 822 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 FAM102BQ5T8I3 360 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 CATSPER4Q7RTX7 472 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 RNF149Q8NC42 400 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 ATXN2LQ8WWM7 1075 aaKnown RBP17.57■□□□□ 0.4
ZNF550-207ENST00000595560 P2RX5Q93086 422 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 LRWD1Q9UFC0 647 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 PIN4Q9Y237 131 aaKnown RBP17.57■□□□□ 0.4
ZNF550-207ENST00000595560 STK24Q9Y6E0 443 aa17.57■□□□□ 0.4
ZNF550-207ENST00000595560 PLXNA4Q9HCM2 1894 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 TBKBP1A7MCY6 615 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 USO1O60763 962 aaKnown RBP17.56■□□□□ 0.4
ZNF550-207ENST00000595560 EOMESO95936 686 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 ARL2P36404 184 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 PHKA2P46019 1235 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 ATP2C1P98194 919 aaPredicted RBP17.56■□□□□ 0.4
ZNF550-207ENST00000595560 POU5F1BQ06416 359 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 PCBP1Q15365 356 aaKnown RBP eCLIP17.56■□□□□ 0.4
ZNF550-207ENST00000595560 NAALADL2Q58DX5 795 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 ZNF598Q86UK7 904 aaKnown RBP17.56■□□□□ 0.4
ZNF550-207ENST00000595560 TMEM117Q9H0C3 514 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 LMAN2LQ9H0V9 348 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 MINDY3Q9H8M7 445 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 AGPAT5Q9NUQ2 364 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 RNF19AQ9NV58 838 aa17.56■□□□□ 0.4
ZNF550-207ENST00000595560 MYO7AQ13402 2215 aa17.55■□□□□ 0.4
ZNF550-207ENST00000595560 A0A087WWV3 80 aa17.55■□□□□ 0.4
ZNF550-207ENST00000595560 ATF7P17544 494 aaPredicted RBP17.55■□□□□ 0.4
ZNF550-207ENST00000595560 PDCP20941 246 aa17.55■□□□□ 0.4
ZNF550-207ENST00000595560 CCT6AP40227 531 aaKnown RBP17.55■□□□□ 0.4
ZNF550-207ENST00000595560 TFDP1Q14186 410 aa17.55■□□□□ 0.4
ZNF550-207ENST00000595560 SKIV2LQ15477 1246 aaKnown RBP17.55■□□□□ 0.4
ZNF550-207ENST00000595560 TIGD5Q53EQ6 642 aa17.55■□□□□ 0.4
ZNF550-207ENST00000595560 TWF2Q6IBS0 349 aaKnown RBP17.55■□□□□ 0.4
ZNF550-207ENST00000595560 BRAPQ7Z569 592 aa17.55■□□□□ 0.4
ZNF550-207ENST00000595560 IFNLR1Q8IU57 520 aaPredicted RBP17.55■□□□□ 0.4
ZNF550-207ENST00000595560 MCPH1Q8NEM0 835 aa17.55■□□□□ 0.4
ZNF550-207ENST00000595560 INTS4Q96HW7 963 aaKnown RBP17.55■□□□□ 0.4
ZNF550-207ENST00000595560 SPTBN5Q9NRC6 3674 aaKnown RBP17.55■□□□□ 0.4
ZNF550-207ENST00000595560 SKIP12755 728 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 GLRA2P23416 452 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 RAB27AP51159 221 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 PTENP60484 403 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 CAPSQ13938 189 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 IL17AQ16552 155 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 ECM1Q16610 540 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 DTHD1Q6ZMT9 781 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 ABI1Q8IZP0 508 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 ASAP3Q8TDY4 903 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 SNX29Q8TEQ0 813 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 RSPH1Q8WYR4 309 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 CASD1Q96PB1 797 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 NFKBIZQ9BYH8 718 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 POLR3FQ9H1D9 316 aaPredicted RBP17.54■□□□□ 0.4
ZNF550-207ENST00000595560 COG5Q9UP83 839 aa17.54■□□□□ 0.4
ZNF550-207ENST00000595560 ARHGEF35A5YM69 484 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 K7ELQ4 463 aaPredicted RBP17.53■□□□□ 0.4
ZNF550-207ENST00000595560 GRM6O15303 877 aa17.53■□□□□ 0.4
ZNF550-207ENST00000595560 HOXA11P31270 313 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms