RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 HS2ST1Q7LGA3 356 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 TMC6Q7Z403 805 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 ASAP3Q8TDY4 903 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 KCNN1Q92952 543 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 JPH2Q9BR39 696 aaPredicted RBP22.85■■□□□ 1.25
PNKP-203ENST00000593946 ARHGAP28Q9P2N2 729 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 IMPACTQ9P2X3 320 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 SRRDQ9UH36 339 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 COL1A2P08123 1366 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 GNA14O95837 355 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 INSRRP14616 1297 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 PBX1P40424 430 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 NAMPTP43490 491 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 MTIF2P46199 727 aaKnown RBP22.85■■□□□ 1.25
PNKP-203ENST00000593946 PPP2R5AQ15172 486 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 GOLGA5Q8TBA6 731 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 TRAPPC12Q8WVT3 735 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 AGPAT3Q9NRZ7 376 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 SAGE1Q9NXZ1 904 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 TBX20Q9UMR3 447 aa22.85■■□□□ 1.25
PNKP-203ENST00000593946 DENND3A2RUS2 1198 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 LGALS16A8MUM7 142 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 H0YCG3 227 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 RPL13P26373 211 aaKnown RBP22.84■■□□□ 1.25
PNKP-203ENST00000593946 HOXD10P28358 340 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 CPT1AP50416 773 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 MKRN4PQ13434 485 aaPredicted RBP22.84■■□□□ 1.25
PNKP-203ENST00000593946 DRP2Q13474 957 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 IER5Q5VY09 327 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 MAP4K3Q8IVH8 894 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 SYCP3Q8IZU3 236 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 TCP11Q8WWU5 503 aa22.84■■□□□ 1.25
PNKP-203ENST00000593946 CLIC2O15247 247 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 DUSP11O75319 330 aaKnown RBP22.83■■□□□ 1.25
PNKP-203ENST00000593946 C22orf31O95567 290 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 F2P00734 622 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 PRKCSHP14314 528 aaPredicted RBP22.83■■□□□ 1.25
PNKP-203ENST00000593946 SCP2P22307 547 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 ABCD1P33897 745 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 MIIPQ5JXC2 388 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 CCDC186Q7Z3E2 898 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 TMEM174Q8WUU8 243 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 AP5M1Q9H0R1 490 aa22.83■■□□□ 1.25
PNKP-203ENST00000593946 CGNQ9P2M7 1197 aaKnown RBP22.83■■□□□ 1.25
PNKP-203ENST00000593946 GNRH1P01148 92 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 PTPN21Q16825 1174 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 SLC9A9Q8IVB4 645 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 DMAC2Q9NW81 257 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 TPM2P07951 284 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 SNRPFP62306 86 aaKnown RBP22.82■■□□□ 1.24
PNKP-203ENST00000593946 IRX5P78411 483 aaPredicted RBP22.82■■□□□ 1.24
PNKP-203ENST00000593946 CACNB2Q08289 660 aaPredicted RBP22.82■■□□□ 1.24
PNKP-203ENST00000593946 TRIM32Q13049 653 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 CAPSQ13938 189 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 MAN2A1Q16706 1144 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 CCDC40Q4G0X9 1142 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 BRDTQ58F21 947 aaPredicted RBP22.82■■□□□ 1.24
PNKP-203ENST00000593946 SPECC1LQ69YQ0 1117 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 TAS1R3Q7RTX0 852 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 LRRC71Q8N4P6 559 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 PRPF31Q8WWY3 499 aaKnown RBP22.82■■□□□ 1.24
PNKP-203ENST00000593946 PSPC1Q8WXF1 523 aaKnown RBP22.82■■□□□ 1.24
PNKP-203ENST00000593946 NOC4LQ9BVI4 516 aaKnown RBP22.82■■□□□ 1.24
PNKP-203ENST00000593946 SUGCTQ9HAC7 445 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 EXOC7Q9UPT5 735 aa22.82■■□□□ 1.24
PNKP-203ENST00000593946 SLC16A3O15427 465 aaKnown RBP22.81■■□□□ 1.24
PNKP-203ENST00000593946 MYBPC2Q14324 1141 aa22.81■■□□□ 1.24
PNKP-203ENST00000593946 MXD4Q14582 209 aaPredicted RBP22.81■■□□□ 1.24
PNKP-203ENST00000593946 C12orf56Q8IXR9 622 aa22.81■■□□□ 1.24
PNKP-203ENST00000593946 KAT2BQ92831 832 aa22.81■■□□□ 1.24
PNKP-203ENST00000593946 ERO1AQ96HE7 468 aa22.81■■□□□ 1.24
PNKP-203ENST00000593946 LRRIQ4A6NIV6 560 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 MAGEB2O15479 319 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 SEPT4O43236 478 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 AKAP3O75969 853 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 ELNP15502 786 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 DNM2P50570 870 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 UBXN1Q04323 297 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 FSCN1Q16658 493 aaKnown RBP22.8■■□□□ 1.24
PNKP-203ENST00000593946 EFCAB12Q6NXP0 572 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 FRMD5Q7Z6J6 570 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 TRIM59Q8IWR1 403 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 TRIP12Q14669 1992 aaPredicted RBP22.8■■□□□ 1.24
PNKP-203ENST00000593946 ITIH6Q6UXX5 1313 aa22.8■■□□□ 1.24
PNKP-203ENST00000593946 FKTNO75072 461 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 KLRC1P26715 233 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 CASP4P49662 377 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 IGBP1P78318 339 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 LAMTOR4Q0VGL1 99 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 PPFIA1Q13136 1202 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 TBX2Q13207 712 aaPredicted RBP22.79■■□□□ 1.24
PNKP-203ENST00000593946 VWA3BQ502W6 1294 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 LINC01465Q8N7H1 131 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 RETREG2Q8NC44 543 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 DEPTORQ8TB45 409 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 MKNK1Q9BUB5 465 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 UPF3AQ9H1J1 476 aaKnown RBP22.79■■□□□ 1.24
PNKP-203ENST00000593946 SCN10AQ9Y5Y9 1956 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 TISP43B9A030 160 aa22.79■■□□□ 1.24
PNKP-203ENST00000593946 ADCY3O60266 1144 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms