RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 ADAM7Q9H2U9 754 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 DNAJB4Q9UDY4 337 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 LIMD1Q9UGP4 676 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 SEPT9Q9UHD8 586 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 CEP131Q9UPN4 1083 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 C2orf16Q68DN1 1984 aa12.65□□□□□ -0.38
PRKCSH-220ENST00000593104 A0A0U1RQF3 1178 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 HOXA2O43364 376 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 GAS7O60861 476 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 STBD1O95210 358 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 SSBP05455 408 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 TMOD1P28289 359 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 PPM1AP35813 382 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 TBC1D8BQ0IIM8 1120 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 TARBP2Q15633 366 aaKnown RBP12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 NTRK3Q16288 839 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 TSGA10IPQ3SY00 556 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 PLA2G4FQ68DD2 849 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 TMC5Q6UXY8 1006 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 ASCL5Q7RTU5 278 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 FAM167AQ96KS9 214 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 SNX27Q96L92 541 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 ZBP1Q9H171 429 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 GLT8D2Q9H1C3 349 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 NRDE2Q9H7Z3 1164 aa12.64□□□□□ -0.39
PRKCSH-220ENST00000593104 HOXB8P17481 243 aaPredicted RBP12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 PHKA2P46019 1235 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 MTMR3Q13615 1198 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 BMP2KLQ5H9B9 411 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 LRCH2Q5VUJ6 765 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 CES5AQ6NT32 575 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 ZNF280BQ86YH2 543 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 SLC5A5Q92911 643 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 NLRP4Q96MN2 994 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 AIFM3Q96NN9 605 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 TEKT3Q9BXF9 490 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 NRBP2Q9NSY0 501 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 TBC1D13Q9NVG8 400 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 DBR1Q9UK59 544 aaKnown RBP12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 SORCS3Q9UPU3 1222 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 PIN4Q9Y237 131 aaKnown RBP12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 SNX14Q9Y5W7 946 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 DENND4AQ7Z401 1863 aa12.63□□□□□ -0.39
PRKCSH-220ENST00000593104 ST18O60284 1047 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 GALTP07902 379 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 SLC11A1P49279 550 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 ALDH7A1P49419 539 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 TPRNQ4KMQ1 711 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 TWF2Q6IBS0 349 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 MIER3Q7Z3K6 550 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 RHPN2Q8IUC4 686 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 TDRD5Q8NAT2 981 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 ST13P5Q8NFI4 369 aaPredicted RBP12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 TBCKQ8TEA7 893 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 SLC22A17Q8WUG5 538 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 TMEM169Q96HH4 297 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 PRRX2Q99811 253 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 NR2E1Q9Y466 385 aa12.62□□□□□ -0.39
PRKCSH-220ENST00000593104 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 EML1O00423 815 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 GALR2O43603 387 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 PI15O43692 258 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 CDC45O75419 566 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 OFD1O75665 1012 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 PSMD10O75832 226 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 DDHD2O94830 711 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 EOMESO95936 686 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 GNA11P29992 359 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 NLRP5P59047 1200 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 ITIH3Q06033 890 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 KRT32Q14532 448 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 CWF19L1Q69YN2 538 aaKnown RBP12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 BLOC1S2Q6QNY1 142 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 TEX2Q8IWB9 1127 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 CCDC12Q8WUD4 166 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 IGSF21Q96ID5 467 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 GCOM2Q9BZD3 368 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 FAM105AQ9NUU6 356 aa12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 SUCLA2Q9P2R7 463 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 WRAP73Q9P2S5 460 aaPredicted RBP12.61□□□□□ -0.39
PRKCSH-220ENST00000593104 NID2Q14112 1375 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 IGKV6-21A0A0C4DH24 114 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 CCDC196A0A1B0GTZ2 297 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 FSD2A1L4K1 749 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 F8W810 466 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 C2CD2LO14523 706 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 SLC37A4O43826 429 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 CTSAP10619 480 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 MTHFRP42898 656 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 JAK3P52333 1124 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 RCAN1P53805 252 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 NPEPPSP55786 919 aa12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 AKAP17AQ02040 695 aaKnown RBP12.6□□□□□ -0.39
PRKCSH-220ENST00000593104 PTPN14Q15678 1187 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms