RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 SFPQP23246 707 aaKnown RBP eCLIP11.4□□□□□ -0.58
VMP1-214ENST00000592106 DNAJB1P25685 340 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 GTF2F1P35269 517 aaKnown RBP eCLIP11.4□□□□□ -0.58
VMP1-214ENST00000592106 IRS1P35568 1242 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 FAM189BP81408 668 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 KRT17Q04695 432 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 DLX2Q07687 328 aaPredicted RBP11.4□□□□□ -0.58
VMP1-214ENST00000592106 STK3Q13188 491 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 CAMK1Q14012 370 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 MTERF2Q49AM1 385 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 FAM102BQ5T8I3 360 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 ADGRD2Q7Z7M1 963 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 SMRP1Q8NCR6 262 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 MRPS27Q92552 414 aaKnown RBP11.4□□□□□ -0.58
VMP1-214ENST00000592106 ADAMTS10Q9H324 1103 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 ENTPD7Q9NQZ7 604 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 PDRG1Q9NUG6 133 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 TYW1Q9NV66 732 aaKnown RBP11.4□□□□□ -0.58
VMP1-214ENST00000592106 DDX25Q9UHL0 483 aaKnown RBP11.4□□□□□ -0.58
VMP1-214ENST00000592106 TRANK1O15050 2925 aa11.4□□□□□ -0.58
VMP1-214ENST00000592106 STK36Q9NRP7 1315 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 CYP3A7-CYP3A51PA0A087WV96 503 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 MARCH6O60337 910 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 TDP2O95551 362 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 EYA4O95677 639 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 EOMESO95936 686 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 CYP3A7P24462 503 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 PLCB3Q01970 1234 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 COASYQ13057 564 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 UGCGQ16739 394 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 DUSP6Q16828 381 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 RBM23Q86U06 439 aaKnown RBP11.39□□□□□ -0.59
VMP1-214ENST00000592106 ZNF410Q86VK4 478 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 ECHDC2Q86YB7 292 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 EXOC8Q8IYI6 725 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 RNF169Q8NCN4 708 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 WASF1Q92558 559 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 MSLNLQ96KJ4 702 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 SLKQ9H2G2 1235 aaPredicted RBP11.39□□□□□ -0.59
VMP1-214ENST00000592106 CWH43Q9H720 699 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 PLXNA4Q9HCM2 1894 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 NGRNQ9NPE2 291 aaKnown RBP11.39□□□□□ -0.59
VMP1-214ENST00000592106 C11orf16Q9NQ32 467 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 CHST12Q9NRB3 414 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 PPME1Q9Y570 386 aa11.39□□□□□ -0.59
VMP1-214ENST00000592106 NCOR1O75376 2440 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 EIF5BO60841 1220 aaKnown RBP11.38□□□□□ -0.59
VMP1-214ENST00000592106 PSMC5P62195 406 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 FOXK1P85037 733 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 ANKRD1Q15327 319 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 TARBP2Q15633 366 aaKnown RBP11.38□□□□□ -0.59
VMP1-214ENST00000592106 LETM2Q2VYF4 491 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 PLPP4Q5VZY2 271 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 KCNT2Q6UVM3 1135 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 NEK8Q86SG6 692 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 FAM20AQ96MK3 541 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 MBOAT7Q96N66 472 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 TCF25Q9BQ70 676 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 NIFKQ9BYG3 293 aaKnown RBP11.38□□□□□ -0.59
VMP1-214ENST00000592106 KCNH6Q9H252 994 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 BRMS1Q9HCU9 246 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 SPG21Q9NZD8 308 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 BARX2Q9UMQ3 279 aaPredicted RBP11.38□□□□□ -0.59
VMP1-214ENST00000592106 WDR81Q562E7 1941 aa11.38□□□□□ -0.59
VMP1-214ENST00000592106 A0A0U1RQF3 1178 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 DDX11L8A8MPP1 907 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 FSCN2O14926 492 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 GAS2O43903 313 aaKnown RBP11.37□□□□□ -0.59
VMP1-214ENST00000592106 GLP2RO95838 553 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 RAB27AP51159 221 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 INF2Q27J81 1249 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 HERC4Q5GLZ8 1057 aaPredicted RBP11.37□□□□□ -0.59
VMP1-214ENST00000592106 TWF2Q6IBS0 349 aaKnown RBP11.37□□□□□ -0.59
VMP1-214ENST00000592106 TMEM87AQ8NBN3 555 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 ETNPPLQ8TBG4 499 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 SLC7A3Q8WY07 619 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 CASP10Q92851 521 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 ZNF668Q96K58 619 aaPredicted RBP11.37□□□□□ -0.59
VMP1-214ENST00000592106 CASD1Q96PB1 797 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 LARP6Q9BRS8 491 aaKnown RBP11.37□□□□□ -0.59
VMP1-214ENST00000592106 PHF7Q9BWX1 381 aaPredicted RBP11.37□□□□□ -0.59
VMP1-214ENST00000592106 CLEC1BQ9P126 229 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 HCSTQ9UBK5 93 aa11.37□□□□□ -0.59
VMP1-214ENST00000592106 PIN4Q9Y237 131 aaKnown RBP11.37□□□□□ -0.59
VMP1-214ENST00000592106 USP15Q9Y4E8 981 aaPredicted RBP11.37□□□□□ -0.59
VMP1-214ENST00000592106 A0A087WZ62 844 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 IGKV6-21A0A0C4DH24 114 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 M0R2N6 131 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 TBX3O15119 743 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 MAFO75444 373 aaPredicted RBP11.36□□□□□ -0.59
VMP1-214ENST00000592106 BAG4O95429 457 aaKnown RBP11.36□□□□□ -0.59
VMP1-214ENST00000592106 ATF7P17544 494 aaPredicted RBP11.36□□□□□ -0.59
VMP1-214ENST00000592106 FGFR4P22455 802 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 CA8P35219 290 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 QARSP47897 775 aaKnown RBP11.36□□□□□ -0.59
VMP1-214ENST00000592106 ALDH7A1P49419 539 aaKnown RBP11.36□□□□□ -0.59
VMP1-214ENST00000592106 POLGP54098 1239 aaPredicted RBP11.36□□□□□ -0.59
VMP1-214ENST00000592106 PPP2R5CQ13362 524 aa11.36□□□□□ -0.59
VMP1-214ENST00000592106 SMC1AQ14683 1233 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms