RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 RPA1P27694 616 aa30.35■■■□□ 2.45
SMAD4-213ENST00000591914 GPM6BQ13491 265 aa30.35■■■□□ 2.45
SMAD4-213ENST00000591914 PAN2Q504Q3 1202 aaKnown RBP30.35■■■□□ 2.45
SMAD4-213ENST00000591914 RILPL1Q5EBL4 403 aa30.35■■■□□ 2.45
SMAD4-213ENST00000591914 FERMT3Q86UX7 667 aa30.35■■■□□ 2.45
SMAD4-213ENST00000591914 ATP6V0A4Q9HBG4 840 aa30.35■■■□□ 2.45
SMAD4-213ENST00000591914 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.35■■■□□ 2.45
SMAD4-213ENST00000591914 CHST12Q9NRB3 414 aa30.35■■■□□ 2.45
SMAD4-213ENST00000591914 FNDC1Q4ZHG4 1894 aaPredicted RBP30.35■■■□□ 2.45
SMAD4-213ENST00000591914 XIRP2A4UGR9 3374 aa30.34■■■□□ 2.45
SMAD4-213ENST00000591914 KIAA1671Q9BY89 1806 aa30.34■■■□□ 2.45
SMAD4-213ENST00000591914 LAD1O00515 517 aa30.34■■■□□ 2.45
SMAD4-213ENST00000591914 ASAP2O43150 1006 aa30.34■■■□□ 2.45
SMAD4-213ENST00000591914 FAM102BQ5T8I3 360 aa30.34■■■□□ 2.45
SMAD4-213ENST00000591914 LARP1BQ659C4 914 aaKnown RBP30.34■■■□□ 2.45
SMAD4-213ENST00000591914 MRPL38Q96DV4 380 aaKnown RBP30.34■■■□□ 2.45
SMAD4-213ENST00000591914 CCDC43Q96MW1 224 aaKnown RBP30.34■■■□□ 2.45
SMAD4-213ENST00000591914 DACT1Q9NYF0 836 aa30.34■■■□□ 2.45
SMAD4-213ENST00000591914 DBR1Q9UK59 544 aaKnown RBP30.34■■■□□ 2.45
SMAD4-213ENST00000591914 SPTBN5Q9NRC6 3674 aaKnown RBP30.34■■■□□ 2.45
SMAD4-213ENST00000591914 VCANP13611 3396 aa30.34■■■□□ 2.45
SMAD4-213ENST00000591914 A0A087WWV3 80 aa30.33■■■□□ 2.45
SMAD4-213ENST00000591914 PDIA5Q14554 519 aa30.33■■■□□ 2.45
SMAD4-213ENST00000591914 ECHDC2Q86YB7 292 aa30.33■■■□□ 2.45
SMAD4-213ENST00000591914 IGSF22Q8N9C0 903 aa30.33■■■□□ 2.45
SMAD4-213ENST00000591914 NACC1Q96RE7 527 aa30.33■■■□□ 2.45
SMAD4-213ENST00000591914 C11orf84Q9BUA3 381 aaPredicted RBP30.33■■■□□ 2.45
SMAD4-213ENST00000591914 TRAIPQ9BWF2 469 aa30.33■■■□□ 2.45
SMAD4-213ENST00000591914 PLVAPQ9BX97 442 aa30.33■■■□□ 2.45
SMAD4-213ENST00000591914 THEGQ9P2T0 379 aa30.33■■■□□ 2.45
SMAD4-213ENST00000591914 A0A0U1RQF3 1178 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 SRGAP2CP0DJJ0 459 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 FGFR1P11362 822 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 MUTP22033 750 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 PRPHP41219 470 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 MXD4Q14582 209 aaPredicted RBP30.32■■■□□ 2.44
SMAD4-213ENST00000591914 PTPROQ16827 1216 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 HAUS3Q68CZ6 603 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 POTEGQ6S5H5 508 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 SRGAP1Q7Z6B7 1085 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 LRWD1Q9UFC0 647 aa30.32■■■□□ 2.44
SMAD4-213ENST00000591914 CATSPER4Q7RTX7 472 aa30.31■■■□□ 2.44
SMAD4-213ENST00000591914 RNF149Q8NC42 400 aa30.31■■■□□ 2.44
SMAD4-213ENST00000591914 MINDY3Q9H8M7 445 aa30.31■■■□□ 2.44
SMAD4-213ENST00000591914 RNF19AQ9NV58 838 aa30.31■■■□□ 2.44
SMAD4-213ENST00000591914 TBKBP1A7MCY6 615 aa30.3■■■□□ 2.44
SMAD4-213ENST00000591914 ARL2P36404 184 aa30.3■■■□□ 2.44
SMAD4-213ENST00000591914 ZNF598Q86UK7 904 aaKnown RBP30.3■■■□□ 2.44
SMAD4-213ENST00000591914 ATXN2LQ8WWM7 1075 aaKnown RBP30.3■■■□□ 2.44
SMAD4-213ENST00000591914 P2RX5Q93086 422 aa30.3■■■□□ 2.44
SMAD4-213ENST00000591914 RAB34Q9BZG1 259 aa30.3■■■□□ 2.44
SMAD4-213ENST00000591914 PIN4Q9Y237 131 aaKnown RBP30.3■■■□□ 2.44
SMAD4-213ENST00000591914 HOXA2O43364 376 aa30.29■■■□□ 2.44
SMAD4-213ENST00000591914 EOMESO95936 686 aa30.29■■■□□ 2.44
SMAD4-213ENST00000591914 POU5F1BQ06416 359 aa30.29■■■□□ 2.44
SMAD4-213ENST00000591914 SKIV2LQ15477 1246 aaKnown RBP30.29■■■□□ 2.44
SMAD4-213ENST00000591914 IL17AQ16552 155 aa30.29■■■□□ 2.44
SMAD4-213ENST00000591914 TMEM117Q9H0C3 514 aa30.29■■■□□ 2.44
SMAD4-213ENST00000591914 AGPAT5Q9NUQ2 364 aa30.29■■■□□ 2.44
SMAD4-213ENST00000591914 STK24Q9Y6E0 443 aa30.29■■■□□ 2.44
SMAD4-213ENST00000591914 USO1O60763 962 aaKnown RBP30.28■■■□□ 2.44
SMAD4-213ENST00000591914 ATF7P17544 494 aaPredicted RBP30.28■■■□□ 2.44
SMAD4-213ENST00000591914 CCT6AP40227 531 aaKnown RBP30.28■■■□□ 2.44
SMAD4-213ENST00000591914 PHKA2P46019 1235 aa30.28■■■□□ 2.44
SMAD4-213ENST00000591914 ATP2C1P98194 919 aaPredicted RBP30.28■■■□□ 2.44
SMAD4-213ENST00000591914 ECM1Q16610 540 aa30.28■■■□□ 2.44
SMAD4-213ENST00000591914 NAALADL2Q58DX5 795 aa30.28■■■□□ 2.44
SMAD4-213ENST00000591914 ASAP3Q8TDY4 903 aa30.28■■■□□ 2.44
SMAD4-213ENST00000591914 GRM6O15303 877 aa30.27■■■□□ 2.44
SMAD4-213ENST00000591914 PTENP60484 403 aa30.27■■■□□ 2.44
SMAD4-213ENST00000591914 CAPSQ13938 189 aa30.27■■■□□ 2.44
SMAD4-213ENST00000591914 TFDP1Q14186 410 aa30.27■■■□□ 2.44
SMAD4-213ENST00000591914 TWF2Q6IBS0 349 aaKnown RBP30.27■■■□□ 2.44
SMAD4-213ENST00000591914 DTHD1Q6ZMT9 781 aa30.27■■■□□ 2.44
SMAD4-213ENST00000591914 IFNLR1Q8IU57 520 aaPredicted RBP30.27■■■□□ 2.44
SMAD4-213ENST00000591914 CASD1Q96PB1 797 aa30.27■■■□□ 2.44
SMAD4-213ENST00000591914 LMAN2LQ9H0V9 348 aa30.27■■■□□ 2.44
SMAD4-213ENST00000591914 PLAGL2Q9UPG8 496 aa30.27■■■□□ 2.44
SMAD4-213ENST00000591914 GLRA2P23416 452 aa30.26■■■□□ 2.43
SMAD4-213ENST00000591914 TIGD5Q53EQ6 642 aa30.26■■■□□ 2.43
SMAD4-213ENST00000591914 CLLU1OSQ5K130 101 aa30.26■■■□□ 2.43
SMAD4-213ENST00000591914 RNF169Q8NCN4 708 aa30.26■■■□□ 2.43
SMAD4-213ENST00000591914 MCPH1Q8NEM0 835 aa30.26■■■□□ 2.43
SMAD4-213ENST00000591914 POLR3FQ9H1D9 316 aaPredicted RBP30.26■■■□□ 2.43
SMAD4-213ENST00000591914 TYW1Q9NV66 732 aaKnown RBP30.26■■■□□ 2.43
SMAD4-213ENST00000591914 SKIP12755 728 aa30.25■■■□□ 2.43
SMAD4-213ENST00000591914 PDCP20941 246 aa30.25■■■□□ 2.43
SMAD4-213ENST00000591914 HOXA11P31270 313 aaPredicted RBP30.25■■■□□ 2.43
SMAD4-213ENST00000591914 PCBP1Q15365 356 aaKnown RBP eCLIP30.25■■■□□ 2.43
SMAD4-213ENST00000591914 SNX29Q8TEQ0 813 aa30.25■■■□□ 2.43
SMAD4-213ENST00000591914 INTS4Q96HW7 963 aaKnown RBP30.25■■■□□ 2.43
SMAD4-213ENST00000591914 NFKBIZQ9BYH8 718 aa30.25■■■□□ 2.43
SMAD4-213ENST00000591914 CWH43Q9H720 699 aa30.25■■■□□ 2.43
SMAD4-213ENST00000591914 HCSTQ9UBK5 93 aa30.25■■■□□ 2.43
SMAD4-213ENST00000591914 COG5Q9UP83 839 aa30.25■■■□□ 2.43
SMAD4-213ENST00000591914 ATG2AQ2TAZ0 1938 aa30.25■■■□□ 2.43
SMAD4-213ENST00000591914 ARHGEF35A5YM69 484 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 ITGB1P05556 798 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 RAB27AP51159 221 aa30.24■■■□□ 2.43
SMAD4-213ENST00000591914 MRPS5P82675 430 aaKnown RBP30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms