RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 IFT122Q9HBG6 1241 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 DBR1Q9UK59 544 aaKnown RBP12.83□□□□□ -0.36
VMP1-211ENST00000591315 MYH15Q9Y2K3 1946 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 GLRA2P23416 452 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
VMP1-211ENST00000591315 CAPSQ13938 189 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 KRT79Q5XKE5 535 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 ARL6IP4Q66PJ3 421 aaKnown RBP12.82□□□□□ -0.36
VMP1-211ENST00000591315 HAUS3Q68CZ6 603 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 CRIPAKQ8N1N5 446 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 CCDC43Q96MW1 224 aaKnown RBP12.82□□□□□ -0.36
VMP1-211ENST00000591315 JPH2Q9BR39 696 aaPredicted RBP12.82□□□□□ -0.36
VMP1-211ENST00000591315 GCOM2Q9BZD3 368 aaPredicted RBP12.82□□□□□ -0.36
VMP1-211ENST00000591315 POLR3FQ9H1D9 316 aaPredicted RBP12.82□□□□□ -0.36
VMP1-211ENST00000591315 FBXO2Q9UK22 296 aaPredicted RBP12.82□□□□□ -0.36
VMP1-211ENST00000591315 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 PPME1Q9Y570 386 aa12.82□□□□□ -0.36
VMP1-211ENST00000591315 LINC01553A4QN01 128 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 C9IYK1 514 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 GPR182O15218 404 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 DGAT1O75907 488 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
VMP1-211ENST00000591315 CYP11B2P19099 503 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 ADGRE1Q14246 886 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 FAM102BQ5T8I3 360 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 CABP7Q86V35 215 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 ARNTL2Q8WYA1 636 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 EPSTI1Q96J88 318 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 RUSC1Q9BVN2 902 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 RAB34Q9BZG1 259 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 RGS18Q9NS28 235 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 HCSTQ9UBK5 93 aa12.81□□□□□ -0.36
VMP1-211ENST00000591315 DAXXQ9UER7 740 aaPredicted RBP12.81□□□□□ -0.36
VMP1-211ENST00000591315 A0A0C4DFX4 3053 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 DENND3A2RUS2 1198 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 EYA4O95677 639 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 F13A1P00488 732 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 PTENP60484 403 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 KARSQ15046 597 aaKnown RBP12.8□□□□□ -0.36
VMP1-211ENST00000591315 LONRF3Q496Y0 759 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 TMEM119Q4V9L6 283 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 PAN2Q504Q3 1202 aaKnown RBP12.8□□□□□ -0.36
VMP1-211ENST00000591315 HYIQ5T013 277 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 ZNF410Q86VK4 478 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
VMP1-211ENST00000591315 TCP11Q8WWU5 503 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 YME1L1Q96TA2 773 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 KIFC3Q9BVG8 833 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 FTHL17Q9BXU8 183 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 ZSCAN16Q9H4T2 348 aaPredicted RBP12.8□□□□□ -0.36
VMP1-211ENST00000591315 RC3H2Q9HBD1 1191 aaKnown RBP12.8□□□□□ -0.36
VMP1-211ENST00000591315 RNF19AQ9NV58 838 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 USP20Q9Y2K6 914 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 INSL6Q9Y581 213 aa12.8□□□□□ -0.36
VMP1-211ENST00000591315 FNDC1Q4ZHG4 1894 aaPredicted RBP12.79□□□□□ -0.36
VMP1-211ENST00000591315 TMEM265A0A087WTH1 108 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 NPHP3-ACAD11A0A0J9YXS1 232 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 DGKIO75912 1065 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 SSBP05455 408 aaKnown RBP eCLIP12.79□□□□□ -0.36
VMP1-211ENST00000591315 LINC00271P0C7V0 271 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 FGFR1P11362 822 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 ATF7P17544 494 aaPredicted RBP12.79□□□□□ -0.36
VMP1-211ENST00000591315 MUTP22033 750 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 SARSP49591 514 aaKnown RBP12.79□□□□□ -0.36
VMP1-211ENST00000591315 FAM189BP81408 668 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 RAD51AP2Q09MP3 1159 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 SLC39A14Q15043 492 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 CATSPER4Q7RTX7 472 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 NPAS4Q8IUM7 802 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 EXOC8Q8IYI6 725 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 DAW1Q8N136 415 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 DNM3Q9UQ16 869 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 BRWD1Q9NSI6 2320 aa12.79□□□□□ -0.36
VMP1-211ENST00000591315 LRRIQ4A6NIV6 560 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 MEIS3P2A8K0S8 358 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 SFI1A8K8P3 1242 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 ASAP2O43150 1006 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 B4GALT5O43286 388 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 GAS2O43903 313 aaKnown RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 BMP15O95972 392 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 EDN1P05305 212 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 PLA2G4BP0C869 781 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 PLCG1P19174 1290 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 HOXA11P31270 313 aaPredicted RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 UBA7P41226 1012 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 NASPP49321 788 aaPredicted RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 CDC42EP1Q00587 391 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 MXD4Q14582 209 aaPredicted RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 AMHR2Q16671 573 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 RINT1Q6NUQ1 792 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 C1orf186Q6ZWK4 172 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms