RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 TBC1D8BQ0IIM8 1120 aa20.11■□□□□ 0.81
VAT1-208ENST00000590924 TARBP2Q15633 366 aaKnown RBP20.11■□□□□ 0.81
VAT1-208ENST00000590924 CLUL1Q15846 466 aa20.11■□□□□ 0.81
VAT1-208ENST00000590924 CSPP1Q1MSJ5 1256 aa20.11■□□□□ 0.81
VAT1-208ENST00000590924 LETM2Q2VYF4 491 aa20.11■□□□□ 0.81
VAT1-208ENST00000590924 SPOUT1Q5T280 376 aaKnown RBP20.11■□□□□ 0.81
VAT1-208ENST00000590924 MIER3Q7Z3K6 550 aa20.11■□□□□ 0.81
VAT1-208ENST00000590924 MSLNLQ96KJ4 702 aa20.11■□□□□ 0.81
VAT1-208ENST00000590924 CD207Q9UJ71 328 aa20.11■□□□□ 0.81
VAT1-208ENST00000590924 HCN4Q9Y3Q4 1203 aa20.11■□□□□ 0.81
VAT1-208ENST00000590924 VPS37CA5D8V6 355 aaPredicted RBP20.1■□□□□ 0.81
VAT1-208ENST00000590924 FAM205CA6NFA0 338 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 HOXA2O43364 376 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 PLA2G5P39877 138 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 COLGALT1Q8NBJ5 622 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 SPRYD3Q8NCJ5 442 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 ETNPPLQ8TBG4 499 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 POP1Q99575 1024 aaKnown RBP20.1■□□□□ 0.81
VAT1-208ENST00000590924 TMEM117Q9H0C3 514 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 ZSCAN16Q9H4T2 348 aaPredicted RBP20.1■□□□□ 0.81
VAT1-208ENST00000590924 CWH43Q9H720 699 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 TLR9Q9NR96 1032 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 TYW1Q9NV66 732 aaKnown RBP20.1■□□□□ 0.81
VAT1-208ENST00000590924 HCSTQ9UBK5 93 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 MTMR6Q9Y217 621 aa20.1■□□□□ 0.81
VAT1-208ENST00000590924 TBX3O15119 743 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 CCNT1O60563 726 aaKnown RBP20.09■□□□□ 0.81
VAT1-208ENST00000590924 FGF18O76093 207 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 EYA4O95677 639 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 DARSP14868 501 aaKnown RBP20.09■□□□□ 0.81
VAT1-208ENST00000590924 ZSCAN20P17040 1043 aaPredicted RBP20.09■□□□□ 0.81
VAT1-208ENST00000590924 LAG3P18627 525 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 RILPL1Q5EBL4 403 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 XKR3Q5GH77 459 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 CEP89Q96ST8 783 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 NIFKQ9BYG3 293 aaKnown RBP20.09■□□□□ 0.81
VAT1-208ENST00000590924 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 RNF19AQ9NV58 838 aa20.09■□□□□ 0.81
VAT1-208ENST00000590924 SEPT9Q9UHD8 586 aaPredicted RBP20.09■□□□□ 0.81
VAT1-208ENST00000590924 DDX25Q9UHL0 483 aaKnown RBP20.09■□□□□ 0.81
VAT1-208ENST00000590924 ZNF318Q5VUA4 2279 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 FSD2A1L4K1 749 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 PRR33A8MZF0 331 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 DCXO43602 365 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 STBD1O95210 358 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 GLP2RO95838 553 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 NRIP1P48552 1158 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 PDE12Q6L8Q7 609 aaKnown RBP20.08■□□□□ 0.81
VAT1-208ENST00000590924 ECHDC2Q86YB7 292 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 THNSL1Q8IYQ7 743 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 SMRP1Q8NCR6 262 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 ZNF668Q96K58 619 aaPredicted RBP20.08■□□□□ 0.81
VAT1-208ENST00000590924 FAM20AQ96MK3 541 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 SCLT1Q96NL6 688 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 CASD1Q96PB1 797 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 CLEC1BQ9P126 229 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 DAXXQ9UER7 740 aaPredicted RBP20.08■□□□□ 0.81
VAT1-208ENST00000590924 LZTS1Q9Y250 596 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 RBM19Q9Y4C8 960 aaKnown RBP20.08■□□□□ 0.81
VAT1-208ENST00000590924 PCDHGC5Q9Y5F6 944 aa20.08■□□□□ 0.81
VAT1-208ENST00000590924 IGKV6-21A0A0C4DH24 114 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 CDC42EP1Q00587 391 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 COASYQ13057 564 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 DRP2Q13474 957 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 MTERF2Q49AM1 385 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 RBM23Q86U06 439 aaKnown RBP20.07■□□□□ 0.8
VAT1-208ENST00000590924 LRRC43Q8N309 656 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 NLRP7Q8WX94 980 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 FAM122AQ96E09 287 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 TLE6Q9H808 572 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 TECTAO75443 2155 aa20.07■□□□□ 0.8
VAT1-208ENST00000590924 MUC6Q6W4X9 2439 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 A0A0U1RQF3 1178 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 SLC37A4O43826 429 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 TOB1P50616 345 aaPredicted RBP20.06■□□□□ 0.8
VAT1-208ENST00000590924 PLCB3Q01970 1234 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 TTC38Q5R3I4 469 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 LRRC55Q6ZSA7 311 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 ABI1Q8IZP0 508 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 MICAL1Q8TDZ2 1067 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 CDCA3Q99618 268 aaPredicted RBP20.06■□□□□ 0.8
VAT1-208ENST00000590924 KCNMB3Q9NPA1 279 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 DACT1Q9NYF0 836 aa20.06■□□□□ 0.8
VAT1-208ENST00000590924 TMEM150BA6NC51 233 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 FSCN2O14926 492 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 BAG4O95429 457 aaKnown RBP20.05■□□□□ 0.8
VAT1-208ENST00000590924 ZSCAN22P10073 491 aaPredicted RBP20.05■□□□□ 0.8
VAT1-208ENST00000590924 PPM1AP35813 382 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 DNM2P50570 870 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 ERVFC1P60507 584 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 RESTQ13127 1097 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 PPP2R5CQ13362 524 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 DUSP6Q16828 381 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 CLLU1OSQ5K130 101 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 ZNF598Q86UK7 904 aaKnown RBP20.05■□□□□ 0.8
VAT1-208ENST00000590924 SLFN12Q8IYM2 578 aa20.05■□□□□ 0.8
VAT1-208ENST00000590924 MRPS27Q92552 414 aaKnown RBP20.05■□□□□ 0.8
VAT1-208ENST00000590924 GCOM2Q9BZD3 368 aaPredicted RBP20.05■□□□□ 0.8
VAT1-208ENST00000590924 BARX2Q9UMQ3 279 aaPredicted RBP20.05■□□□□ 0.8
VAT1-208ENST00000590924 NEMFO60524 1076 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms