RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 ASAP3Q8TDY4 903 aa24.89■■□□□ 1.58
MBD3-208ENST00000590830 CLP1Q92989 425 aaKnown RBP24.89■■□□□ 1.58
MBD3-208ENST00000590830 SAMD11Q96NU1 681 aa24.89■■□□□ 1.58
MBD3-208ENST00000590830 RNF19AQ9NV58 838 aa24.89■■□□□ 1.58
MBD3-208ENST00000590830 MRPL42Q9Y6G3 142 aaKnown RBP24.89■■□□□ 1.58
MBD3-208ENST00000590830 ASAP2O43150 1006 aa24.88■■□□□ 1.57
MBD3-208ENST00000590830 ZSCAN20P17040 1043 aaPredicted RBP24.88■■□□□ 1.57
MBD3-208ENST00000590830 SYT1P21579 422 aa24.88■■□□□ 1.57
MBD3-208ENST00000590830 CDC25AP30304 524 aa24.88■■□□□ 1.57
MBD3-208ENST00000590830 CCT6AP40227 531 aaKnown RBP24.88■■□□□ 1.57
MBD3-208ENST00000590830 DTHD1Q6ZMT9 781 aa24.88■■□□□ 1.57
MBD3-208ENST00000590830 MICALL1Q8N3F8 863 aa24.88■■□□□ 1.57
MBD3-208ENST00000590830 INO80BQ9C086 356 aaPredicted RBP24.88■■□□□ 1.57
MBD3-208ENST00000590830 ELAC1Q9H777 363 aaKnown RBP24.88■■□□□ 1.57
MBD3-208ENST00000590830 ATP6V0A4Q9HBG4 840 aa24.88■■□□□ 1.57
MBD3-208ENST00000590830 TMEM161AQ9NX61 479 aa24.88■■□□□ 1.57
MBD3-208ENST00000590830 USO1O60763 962 aaKnown RBP24.87■■□□□ 1.57
MBD3-208ENST00000590830 FGFR1P11362 822 aa24.87■■□□□ 1.57
MBD3-208ENST00000590830 BMPR1AP36894 532 aa24.87■■□□□ 1.57
MBD3-208ENST00000590830 ECHDC2Q86YB7 292 aa24.87■■□□□ 1.57
MBD3-208ENST00000590830 RNF149Q8NC42 400 aa24.87■■□□□ 1.57
MBD3-208ENST00000590830 MMTAG2Q9BU76 263 aaKnown RBP24.87■■□□□ 1.57
MBD3-208ENST00000590830 GPRC5CQ9NQ84 441 aa24.87■■□□□ 1.57
MBD3-208ENST00000590830 CHST12Q9NRB3 414 aa24.87■■□□□ 1.57
MBD3-208ENST00000590830 UNC80Q8N2C7 3258 aa24.87■■□□□ 1.57
MBD3-208ENST00000590830 PRRC2BQ5JSZ5 2229 aaKnown RBP24.86■■□□□ 1.57
MBD3-208ENST00000590830 VPS37CA5D8V6 355 aaPredicted RBP24.86■■□□□ 1.57
MBD3-208ENST00000590830 H3BNC9 293 aa24.86■■□□□ 1.57
MBD3-208ENST00000590830 GTPBP6O43824 516 aaPredicted RBP24.86■■□□□ 1.57
MBD3-208ENST00000590830 MUTP22033 750 aa24.86■■□□□ 1.57
MBD3-208ENST00000590830 SFPQP23246 707 aaKnown RBP eCLIP24.86■■□□□ 1.57
MBD3-208ENST00000590830 GLRA2P23416 452 aa24.86■■□□□ 1.57
MBD3-208ENST00000590830 MAEAQ7L5Y9 396 aa24.86■■□□□ 1.57
MBD3-208ENST00000590830 CATSPER4Q7RTX7 472 aa24.86■■□□□ 1.57
MBD3-208ENST00000590830 SRGAP1Q7Z6B7 1085 aa24.86■■□□□ 1.57
MBD3-208ENST00000590830 ZNF598Q86UK7 904 aaKnown RBP24.86■■□□□ 1.57
MBD3-208ENST00000590830 KIAA1024Q9UPX6 916 aa24.86■■□□□ 1.57
MBD3-208ENST00000590830 REV3LO60673 3130 aa24.86■■□□□ 1.57
MBD3-208ENST00000590830 SPTBN5Q9NRC6 3674 aaKnown RBP24.85■■□□□ 1.57
MBD3-208ENST00000590830 ARID2Q68CP9 1835 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 A0A0U1RQF3 1178 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 C5orf67F2Z3F1 127 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 ATF7P17544 494 aaPredicted RBP24.85■■□□□ 1.57
MBD3-208ENST00000590830 PDCP20941 246 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 HOXA11P31270 313 aaPredicted RBP24.85■■□□□ 1.57
MBD3-208ENST00000590830 GPM6BQ13491 265 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 CAPSQ13938 189 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 MXD4Q14582 209 aaPredicted RBP24.85■■□□□ 1.57
MBD3-208ENST00000590830 HAUS3Q68CZ6 603 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 BRAPQ7Z569 592 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.85■■□□□ 1.57
MBD3-208ENST00000590830 SNX29Q8TEQ0 813 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 CCDC43Q96MW1 224 aaKnown RBP24.85■■□□□ 1.57
MBD3-208ENST00000590830 POLR3FQ9H1D9 316 aaPredicted RBP24.85■■□□□ 1.57
MBD3-208ENST00000590830 LMCD1Q9NZU5 365 aa24.85■■□□□ 1.57
MBD3-208ENST00000590830 A0A0C4DFX4 3053 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 TBKBP1A7MCY6 615 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 CTNNB1P35222 781 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 PTENP60484 403 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 RESTQ13127 1097 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 PADI6Q6TGC4 694 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 TRAIPQ9BWF2 469 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 RAB34Q9BZG1 259 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 DDX19AQ9NUU7 478 aaKnown RBP24.84■■□□□ 1.57
MBD3-208ENST00000590830 HCSTQ9UBK5 93 aa24.84■■□□□ 1.57
MBD3-208ENST00000590830 PIN4Q9Y237 131 aaKnown RBP24.84■■□□□ 1.57
MBD3-208ENST00000590830 COL4A4P53420 1690 aaPredicted RBP24.83■■□□□ 1.57
MBD3-208ENST00000590830 RB1P06400 928 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 CYP11B2P19099 503 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 POU5F1BQ06416 359 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 IFNLR1Q8IU57 520 aaPredicted RBP24.83■■□□□ 1.57
MBD3-208ENST00000590830 CASD1Q96PB1 797 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 BHMT2Q9H2M3 363 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 POLD4Q9HCU8 107 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 AGPAT5Q9NUQ2 364 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 RNF216Q9NWF9 866 aaPredicted RBP24.83■■□□□ 1.57
MBD3-208ENST00000590830 DACT1Q9NYF0 836 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 MTMR6Q9Y217 621 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 STK24Q9Y6E0 443 aa24.83■■□□□ 1.57
MBD3-208ENST00000590830 ARHGEF35A5YM69 484 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 VWA3AA6NCI4 1184 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 E9PMD0 336 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 GRM6O15303 877 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 PHKA2P46019 1235 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 CLLU1OSQ5K130 101 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 KRT79Q5XKE5 535 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 ARL6IP4Q66PJ3 421 aaKnown RBP24.82■■□□□ 1.56
MBD3-208ENST00000590830 FAM173BQ6P4H8 233 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 LRRC55Q6ZSA7 311 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 KCNK18Q7Z418 384 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 RNF169Q8NCN4 708 aa24.82■■□□□ 1.56
MBD3-208ENST00000590830 TYW1Q9NV66 732 aaKnown RBP24.82■■□□□ 1.56
MBD3-208ENST00000590830 EOMESO95936 686 aa24.81■■□□□ 1.56
MBD3-208ENST00000590830 MBTD1Q05BQ5 628 aa24.81■■□□□ 1.56
MBD3-208ENST00000590830 TFDP1Q14186 410 aa24.81■■□□□ 1.56
MBD3-208ENST00000590830 UBXN11Q5T124 520 aa24.81■■□□□ 1.56
MBD3-208ENST00000590830 TWF2Q6IBS0 349 aaKnown RBP24.81■■□□□ 1.56
MBD3-208ENST00000590830 MCPH1Q8NEM0 835 aa24.81■■□□□ 1.56
MBD3-208ENST00000590830 BSNDQ8WZ55 320 aa24.81■■□□□ 1.56
MBD3-208ENST00000590830 PNMA5Q96PV4 448 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms