RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 USP38Q8NB14 1042 aa23.37■■□□□ 1.33
CIRBP-229ENST00000590704 MCPH1Q8NEM0 835 aa23.37■■□□□ 1.33
CIRBP-229ENST00000590704 SRGAP2CP0DJJ0 459 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 CMA1P23946 247 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 PTENP60484 403 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 DSC3Q14574 896 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 RRAGBQ5VZM2 374 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 ADGRA3Q8IWK6 1321 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 PDILTQ8N807 584 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 RNF149Q8NC42 400 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 LARP4BQ92615 738 aaKnown RBP23.36■■□□□ 1.33
CIRBP-229ENST00000590704 CDK5RAP3Q96JB5 506 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 NLRP4Q96MN2 994 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 SFI1A8K8P3 1242 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 M0QZ92 97 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 ENPP3O14638 875 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 HIP1RO75146 1068 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 DEFB103AP81534 67 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 CDC42EP1Q00587 391 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 MXD4Q14582 209 aaPredicted RBP23.36■■□□□ 1.33
CIRBP-229ENST00000590704 AMHR2Q16671 573 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 HABP4Q5JVS0 413 aaKnown RBP23.36■■□□□ 1.33
CIRBP-229ENST00000590704 FAM102BQ5T8I3 360 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 GOLPH3LQ9H4A5 285 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 STK17AQ9UEE5 414 aa23.36■■□□□ 1.33
CIRBP-229ENST00000590704 TTC3P53804 2025 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 A0A1W2PPC1 479 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 MYMKA6NI61 221 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 RPS6KA5O75582 802 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 WDR5P61964 334 aaKnown RBP23.35■■□□□ 1.33
CIRBP-229ENST00000590704 GIT2Q14161 759 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 NLRP7Q8WX94 980 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 SEPT8Q92599 483 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 DNAJC19Q96DA6 116 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 FIZ1Q96SL8 496 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 NFKBIZQ9BYH8 718 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 CCDC39Q9UFE4 941 aa23.35■■□□□ 1.33
CIRBP-229ENST00000590704 A0A1B0GVL5 298 aa23.34■■□□□ 1.33
CIRBP-229ENST00000590704 ABHD14A-ACY1A0A1B0GW23 586 aa23.34■■□□□ 1.33
CIRBP-229ENST00000590704 EDN1P05305 212 aa23.34■■□□□ 1.33
CIRBP-229ENST00000590704 HOXA11P31270 313 aaPredicted RBP23.34■■□□□ 1.33
CIRBP-229ENST00000590704 CACNB1Q02641 598 aaPredicted RBP23.34■■□□□ 1.33
CIRBP-229ENST00000590704 RAD51AP2Q09MP3 1159 aa23.34■■□□□ 1.33
CIRBP-229ENST00000590704 DHX8Q14562 1220 aaKnown RBP23.34■■□□□ 1.33
CIRBP-229ENST00000590704 CDCA2Q69YH5 1023 aaPredicted RBP23.34■■□□□ 1.33
CIRBP-229ENST00000590704 TMCO2Q7Z6W1 182 aaPredicted RBP23.34■■□□□ 1.33
CIRBP-229ENST00000590704 CCDC43Q96MW1 224 aaKnown RBP23.34■■□□□ 1.33
CIRBP-229ENST00000590704 KBTBD4Q9NVX7 518 aa23.34■■□□□ 1.33
CIRBP-229ENST00000590704 A0A1W2PQ27 194 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 A0A1W2PQ64 194 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 A0A1W2PQD8 194 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 GRXCR1A8MXD5 290 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 SOX1O00570 391 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-229ENST00000590704 BAIAP3O94812 1187 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 SSBP05455 408 aaKnown RBP eCLIP23.33■■□□□ 1.33
CIRBP-229ENST00000590704 LRIT3Q3SXY7 679 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 CCDC73Q6ZRK6 1079 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 GPBP1Q86WP2 473 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 APBB2Q92870 758 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 RNPC3Q96LT9 517 aaKnown RBP23.33■■□□□ 1.33
CIRBP-229ENST00000590704 REEP2Q9BRK0 252 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 NTPCRQ9BSD7 190 aaKnown RBP23.33■■□□□ 1.33
CIRBP-229ENST00000590704 GCOM2Q9BZD3 368 aaPredicted RBP23.33■■□□□ 1.33
CIRBP-229ENST00000590704 KCND2Q9NZV8 630 aa23.33■■□□□ 1.33
CIRBP-229ENST00000590704 TTLL13PA6NNM8 815 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 POLR2DO15514 142 aaKnown RBP23.32■■□□□ 1.32
CIRBP-229ENST00000590704 PFKFB1P16118 471 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 ZNF131P52739 623 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 MBTD1Q05BQ5 628 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 NFX1Q12986 1120 aaKnown RBP23.32■■□□□ 1.32
CIRBP-229ENST00000590704 IKBKEQ14164 716 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 TAS1R3Q7RTX0 852 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 SRGAP1Q7Z6B7 1085 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 STAMQ92783 540 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 KIFAP3Q92845 792 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 CCDC113Q9H0I3 377 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 KCNH3Q9ULD8 1083 aa23.32■■□□□ 1.32
CIRBP-229ENST00000590704 GPR182O15218 404 aa23.31■■□□□ 1.32
CIRBP-229ENST00000590704 STAT6P42226 847 aa23.31■■□□□ 1.32
CIRBP-229ENST00000590704 NDUFA8P51970 172 aa23.31■■□□□ 1.32
CIRBP-229ENST00000590704 PAK2Q13177 524 aa23.31■■□□□ 1.32
CIRBP-229ENST00000590704 CLEC17AQ6ZS10 378 aa23.31■■□□□ 1.32
CIRBP-229ENST00000590704 DHX58Q96C10 678 aa23.31■■□□□ 1.32
CIRBP-229ENST00000590704 KIFC3Q9BVG8 833 aa23.31■■□□□ 1.32
CIRBP-229ENST00000590704 TSPYL2Q9H2G4 693 aaPredicted RBP23.31■■□□□ 1.32
CIRBP-229ENST00000590704 ACTN4O43707 911 aaKnown RBP23.3■■□□□ 1.32
CIRBP-229ENST00000590704 TXLNAP40222 546 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 NAMPTP43490 491 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 NPTX2P47972 431 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 DDX12PQ92771 950 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 TIPINQ9BVW5 301 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 FZD8Q9H461 694 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 CDH23Q9H251 3354 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 COL4A6Q14031 1691 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 MYH11P35749 1972 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 C9IYK1 514 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 ACTN1P12814 892 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 FAM189BP81408 668 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 LONRF3Q496Y0 759 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 ENGASEQ8NFI3 743 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms