RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 TMEM87AQ8NBN3 555 aa17.04■□□□□ 0.32
GHDC-211ENST00000590520 NLRP7Q8WX94 980 aa17.04■□□□□ 0.32
GHDC-211ENST00000590520 ZNF668Q96K58 619 aaPredicted RBP17.04■□□□□ 0.32
GHDC-211ENST00000590520 MFSD1Q9H3U5 465 aa17.04■□□□□ 0.32
GHDC-211ENST00000590520 SMOC2Q9H3U7 446 aa17.04■□□□□ 0.32
GHDC-211ENST00000590520 FAM217BQ9NTX9 383 aaPredicted RBP17.04■□□□□ 0.32
GHDC-211ENST00000590520 DBR1Q9UK59 544 aaKnown RBP17.04■□□□□ 0.32
GHDC-211ENST00000590520 USTQ9Y2C2 406 aa17.04■□□□□ 0.32
GHDC-211ENST00000590520 C2orf16Q68DN1 1984 aa17.04■□□□□ 0.32
GHDC-211ENST00000590520 NT5C1B-RDH14C9J2C7 533 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 ZNF862O60290 1169 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 ZC3H11AO75152 810 aaKnown RBP eCLIP17.03■□□□□ 0.32
GHDC-211ENST00000590520 ASGR2P07307 311 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 FGFR4P22455 802 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 CIITAP33076 1130 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 POLGP54098 1239 aaPredicted RBP17.03■□□□□ 0.32
GHDC-211ENST00000590520 TBC1D8BQ0IIM8 1120 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 ATAT1Q5SQI0 421 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 VPS52Q8N1B4 723 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 PLCD3Q8N3E9 789 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 LENG9Q96B70 501 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 DISC1Q9NRI5 854 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 NRBP2Q9NSY0 501 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 IRAK3Q9Y616 596 aa17.03■□□□□ 0.32
GHDC-211ENST00000590520 CCDC196A0A1B0GTZ2 297 aa17.02■□□□□ 0.32
GHDC-211ENST00000590520 CXCL14O95715 111 aa17.02■□□□□ 0.32
GHDC-211ENST00000590520 EPCAMP16422 314 aa17.02■□□□□ 0.32
GHDC-211ENST00000590520 GNA11P29992 359 aa17.02■□□□□ 0.32
GHDC-211ENST00000590520 JAK3P52333 1124 aa17.02■□□□□ 0.32
GHDC-211ENST00000590520 TMEM173Q86WV6 379 aaPredicted RBP17.02■□□□□ 0.32
GHDC-211ENST00000590520 C12orf76Q8N812 135 aaPredicted RBP17.02■□□□□ 0.32
GHDC-211ENST00000590520 CHST12Q9NRB3 414 aa17.02■□□□□ 0.32
GHDC-211ENST00000590520 NAP1L2Q9ULW6 460 aaPredicted RBP17.02■□□□□ 0.32
GHDC-211ENST00000590520 NID2Q14112 1375 aa17.02■□□□□ 0.31
GHDC-211ENST00000590520 ADAMTS3O15072 1205 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 CTSAP10619 480 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 SKIP12755 728 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 SFPQP23246 707 aaKnown RBP eCLIP17.01■□□□□ 0.31
GHDC-211ENST00000590520 SFNP31947 248 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 PHKA2P46019 1235 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 KRT32Q14532 448 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 UGCGQ16739 394 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 DDX53Q86TM3 631 aaKnown RBP17.01■□□□□ 0.31
GHDC-211ENST00000590520 CABP7Q86V35 215 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 BICD2Q8TD16 824 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 AUTS2Q8WXX7 1259 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 TRAIPQ9BWF2 469 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 GCOM2Q9BZD3 368 aaPredicted RBP17.01■□□□□ 0.31
GHDC-211ENST00000590520 SFXN1Q9H9B4 322 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
GHDC-211ENST00000590520 MSH4O15457 936 aa17■□□□□ 0.31
GHDC-211ENST00000590520 CHMP2AO43633 222 aa17■□□□□ 0.31
GHDC-211ENST00000590520 GAS7O60861 476 aa17■□□□□ 0.31
GHDC-211ENST00000590520 HMGB1P09429 215 aaKnown RBP17■□□□□ 0.31
GHDC-211ENST00000590520 RAB27AP51159 221 aa17■□□□□ 0.31
GHDC-211ENST00000590520 CLCN5P51795 746 aa17■□□□□ 0.31
GHDC-211ENST00000590520 CDC42EP1Q00587 391 aa17■□□□□ 0.31
GHDC-211ENST00000590520 ADCK5Q3MIX3 580 aa17■□□□□ 0.31
GHDC-211ENST00000590520 TSGA10IPQ3SY00 556 aa17■□□□□ 0.31
GHDC-211ENST00000590520 CWF19L1Q69YN2 538 aaKnown RBP17■□□□□ 0.31
GHDC-211ENST00000590520 TWF2Q6IBS0 349 aaKnown RBP17■□□□□ 0.31
GHDC-211ENST00000590520 GLB1LQ6UWU2 654 aa17■□□□□ 0.31
GHDC-211ENST00000590520 CCDC149Q6ZUS6 474 aa17■□□□□ 0.31
GHDC-211ENST00000590520 PPFIBP1Q86W92 1011 aa17■□□□□ 0.31
GHDC-211ENST00000590520 CCDC148Q8NFR7 591 aa17■□□□□ 0.31
GHDC-211ENST00000590520 SLC22A17Q8WUG5 538 aa17■□□□□ 0.31
GHDC-211ENST00000590520 ACSF2Q96CM8 615 aaPredicted RBP17■□□□□ 0.31
GHDC-211ENST00000590520 IGSF21Q96ID5 467 aa17■□□□□ 0.31
GHDC-211ENST00000590520 RIT2Q99578 217 aa17■□□□□ 0.31
GHDC-211ENST00000590520 TEKT3Q9BXF9 490 aa17■□□□□ 0.31
GHDC-211ENST00000590520 LIMD1Q9UGP4 676 aa17■□□□□ 0.31
GHDC-211ENST00000590520 SEPT9Q9UHD8 586 aaPredicted RBP17■□□□□ 0.31
GHDC-211ENST00000590520 SPDYE4A6NLX3 237 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 CSDE1O75534 798 aaKnown RBP16.99■□□□□ 0.31
GHDC-211ENST00000590520 ADD1P35611 737 aaKnown RBP16.99■□□□□ 0.31
GHDC-211ENST00000590520 FGD1P98174 961 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 DRP2Q13474 957 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 TARBP2Q15633 366 aaKnown RBP16.99■□□□□ 0.31
GHDC-211ENST00000590520 LRCH2Q5VUJ6 765 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 TMC5Q6UXY8 1006 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 FRMD5Q7Z6J6 570 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 RDM1Q8NG50 284 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 BCL7CQ8WUZ0 217 aaPredicted RBP16.99■□□□□ 0.31
GHDC-211ENST00000590520 NKD2Q969F2 451 aaPredicted RBP16.99■□□□□ 0.31
GHDC-211ENST00000590520 UNC45AQ9H3U1 944 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 TBC1D13Q9NVG8 400 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 STK39Q9UEW8 545 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 PIN4Q9Y237 131 aaKnown RBP16.99■□□□□ 0.31
GHDC-211ENST00000590520 CACNA1AO00555 2505 aa16.99■□□□□ 0.31
GHDC-211ENST00000590520 PRPF3O43395 683 aaKnown RBP16.98■□□□□ 0.31
GHDC-211ENST00000590520 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
GHDC-211ENST00000590520 PTPN14Q15678 1187 aa16.98■□□□□ 0.31
GHDC-211ENST00000590520 MTERF2Q49AM1 385 aa16.98■□□□□ 0.31
GHDC-211ENST00000590520 NOMO2Q5JPE7 1267 aa16.98■□□□□ 0.31
GHDC-211ENST00000590520 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
GHDC-211ENST00000590520 OTOP3Q7RTS5 596 aa16.98■□□□□ 0.31
GHDC-211ENST00000590520 ZNF410Q86VK4 478 aa16.98■□□□□ 0.31
GHDC-211ENST00000590520 RASEFQ8IZ41 740 aa16.98■□□□□ 0.31
GHDC-211ENST00000590520 FLCNQ8NFG4 579 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms