RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SNX12Q9UMY4 172 aa15.74■□□□□ 0.11
RETREG3-208ENST00000589797 FAM237AA0A1B0GTK4 181 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 ATP2A1O14983 1001 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 PLSCR1O15162 318 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 CSDE1O75534 798 aaKnown RBP15.73■□□□□ 0.11
RETREG3-208ENST00000589797 TNNC2P02585 160 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 GGCXP38435 758 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 SLC18A3Q16572 532 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 HP1BP3Q5SSJ5 553 aaPredicted RBP15.73■□□□□ 0.11
RETREG3-208ENST00000589797 DDX42Q86XP3 938 aaKnown RBP eCLIP15.73■□□□□ 0.11
RETREG3-208ENST00000589797 LRRC71Q8N4P6 559 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 C4orf32Q8N8J7 132 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 FAM84AQ96KN4 292 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 ERGIC2Q96RQ1 377 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 PLCD4Q9BRC7 762 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 SLC9A2Q9UBY0 812 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 TTLL3Q9Y4R7 772 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 TERF2Q15554 542 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 DENND2CQ68D51 928 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 ZNF302Q9NR11 478 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 CNOT8Q9UFF9 292 aaKnown RBP15.73■□□□□ 0.11
RETREG3-208ENST00000589797 PEX10O60683 326 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 FRMD5Q7Z6J6 570 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 NLRP7Q8WX94 980 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 RAB17Q9H0T7 212 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 TBK1Q9UHD2 729 aa15.73■□□□□ 0.11
RETREG3-208ENST00000589797 KCNJ6P48051 423 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 CCT5P48643 541 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 JAK3P52333 1124 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 HERVK_113P62684 666 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 FAM118BQ9BPY3 351 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 IDI2Q9BXS1 227 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 EHD4Q9H223 541 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 ATP6V0A4Q9HBG4 840 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 TUFT1Q9NNX1 390 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 PIK3R2O00459 728 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 GAS8O95995 478 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 VCAM1P19320 739 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 PSMD1Q99460 953 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 BCAS3Q9H6U6 928 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 VPS37BQ9H9H4 285 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 L2HGDHQ9H9P8 463 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 RBM12Q9NTZ6 932 aaKnown RBP15.72■□□□□ 0.11
RETREG3-208ENST00000589797 COL1A1P02452 1464 aaPredicted RBP15.72■□□□□ 0.11
RETREG3-208ENST00000589797 TBX3O15119 743 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 DDNO94850 711 aaPredicted RBP15.72■□□□□ 0.11
RETREG3-208ENST00000589797 GGPS1O95749 300 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 TBX2Q13207 712 aaPredicted RBP15.72■□□□□ 0.11
RETREG3-208ENST00000589797 PPP2R5AQ15172 486 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 CBWD2Q8IUF1 395 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 RNF149Q8NC42 400 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 GMCL1Q96IK5 515 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 HSD3B7Q9H2F3 369 aa15.72■□□□□ 0.11
RETREG3-208ENST00000589797 SLITRK3O94933 977 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 PGK2P07205 417 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 MTM1Q13496 603 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 TKFCQ3LXA3 575 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 SGO2Q562F6 1265 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 IRF2BP1Q8IU81 584 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 ADAM33Q9BZ11 813 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 RGS16O15492 202 aaPredicted RBP15.71■□□□□ 0.11
RETREG3-208ENST00000589797 BFSP1Q12934 665 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 MICALCLQ6ZW33 695 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 SH3BP5LQ7L8J4 393 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 LPAR1Q92633 364 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 AGPAT3Q9NRZ7 376 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 YDJCA8MPS7 323 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 KRT15P19012 456 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 CA8P35219 290 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 SOX5P35711 763 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 MUM1L1Q5H9M0 696 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 CCDC63Q8NA47 563 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 MCPH1Q8NEM0 835 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 RNF25Q96BH1 459 aaPredicted RBP15.71■□□□□ 0.11
RETREG3-208ENST00000589797 ADPGKQ9BRR6 497 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 CAPS2Q9BXY5 557 aa15.71■□□□□ 0.11
RETREG3-208ENST00000589797 MKRN1Q9UHC7 482 aaKnown RBP15.71■□□□□ 0.11
RETREG3-208ENST00000589797 EPHB4P54760 987 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 CDO1Q16878 200 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 KLHDC7AQ5VTJ3 777 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 RUFY4Q6ZNE9 571 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 MSANTD4Q8NCY6 345 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 TARS2Q9BW92 718 aaKnown RBP15.7■□□□□ 0.1
RETREG3-208ENST00000589797 FOXN3O00409 490 aaPredicted RBP15.7■□□□□ 0.1
RETREG3-208ENST00000589797 GABPAQ06546 454 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 SNRNP35Q16560 246 aaKnown RBP15.7■□□□□ 0.1
RETREG3-208ENST00000589797 AGBL3Q8NEM8 1001 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 FAM71BQ8TC56 605 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 CPA5Q8WXQ8 436 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 IQCGQ9H095 443 aaKnown RBP15.7■□□□□ 0.1
RETREG3-208ENST00000589797 KLHL11Q9NVR0 708 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 TMEM62Q0P6H9 643 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 NFX1Q12986 1120 aaKnown RBP15.7■□□□□ 0.1
RETREG3-208ENST00000589797 KRT39Q6A163 491 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 CALN1Q9BXU9 219 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 DNAJC18Q9H819 358 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 ADAM22Q9P0K1 906 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 SEL1LQ9UBV2 794 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 MYH2Q9UKX2 1941 aa15.7■□□□□ 0.1
RETREG3-208ENST00000589797 ICAM1P05362 532 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms