RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 C14orf80Q86SX3 495 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 SPACA3Q8IXA5 215 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 CISD2Q8N5K1 135 aaKnown RBP6.76□□□□□ -1.33
SMAD4-208ENST00000589706 C2orf69Q8N8R5 385 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 FAM181AQ8N9Y4 354 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 PANK1Q8TE04 598 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 ANKRD7Q92527 254 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 UBE2FQ969M7 185 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 CHAMP1Q96JM3 812 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 RTFDC1Q9BY42 306 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-208ENST00000589706 TAOK3Q9H2K8 898 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 MED4Q9NPJ6 270 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 DIAPH3Q9NSV4 1193 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 CATSPERZQ9NTU4 200 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 TERF2IPQ9NYB0 399 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 DUSP13Q9UII6 198 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 KNSTRNQ9Y448 316 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 TIMM13Q9Y5L4 95 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-208ENST00000589706 KDRP35968 1356 aa6.76□□□□□ -1.33
SMAD4-208ENST00000589706 MYH14Q7Z406 1995 aaKnown RBP6.76□□□□□ -1.33
SMAD4-208ENST00000589706 NPC1L1Q9UHC9 1359 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 LOC102724159A0A0B4J2E5 919 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-208ENST00000589706 C7orf72A4D263 438 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 GOLGA6L6A8MZA4 724 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 GOLIM4O00461 696 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 SERPINB2P05120 415 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 GNALP38405 381 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 GTF2A2P52657 109 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 RPL11P62913 178 aaKnown RBP6.75□□□□□ -1.33
SMAD4-208ENST00000589706 PWP2Q15269 919 aaKnown RBP6.75□□□□□ -1.33
SMAD4-208ENST00000589706 TERF2Q15554 542 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 CRY1Q16526 586 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 PTPN21Q16825 1174 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 RNF43Q68DV7 783 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 CCSAPQ6IQ19 270 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-208ENST00000589706 CYP2R1Q6VVX0 501 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 HDGFL2Q7Z4V5 671 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-208ENST00000589706 NAT16Q8N8M0 369 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 GPATCH11Q8N954 259 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 SEMA3GQ9NS98 782 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 FBXL7Q9UJT9 491 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 ZNF180Q9UJW8 692 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 CBLCQ9ULV8 474 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 SH3BP1Q9Y3L3 701 aa6.75□□□□□ -1.33
SMAD4-208ENST00000589706 MORC2Q9Y6X9 1032 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-208ENST00000589706 AFDNP55196 1824 aaKnown RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 COL5A3P25940 1745 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 TMEM82A0PJX8 343 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 TPD52L2O43399 206 aaKnown RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CAND2O75155 1236 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CEACAM5P06731 702 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 BCL6P41182 706 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CHRNA4P43681 627 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CRKLP46109 303 aaKnown RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CLCN7P51798 805 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 ERVK-21P61565 698 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 LACTBP83111 547 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 NFIXQ14938 502 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 ABCB5Q2M3G0 1257 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 OTOP1Q7RTM1 612 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 SAPCD2Q86UD0 394 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 NBPF5PQ86XG9 351 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CERS3Q8IU89 383 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CBARPQ8N350 705 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 TP53INP1Q96A56 240 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 AHCYL2Q96HN2 611 aaKnown RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CDIP1Q9H305 208 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 VTA1Q9NP79 307 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 CLDND1Q9NY35 253 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 H2AFY2Q9P0M6 372 aaPredicted RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 PLAGL2Q9UPG8 496 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 PCDHA11Q9Y5I1 949 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 EDC4Q6P2E9 1401 aaKnown RBP6.74□□□□□ -1.33
SMAD4-208ENST00000589706 ZNF831Q5JPB2 1677 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 ZNF541Q9H0D2 1346 aa6.74□□□□□ -1.33
SMAD4-208ENST00000589706 TRPM7Q96QT4 1865 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 GOLGA6L22H0YM25 854 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 NPHS1O60500 1241 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 RFPL1O75677 317 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 ABLIM3O94929 683 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 ZNF853P0CG23 659 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 SESN3P58005 492 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 MLC1Q15049 377 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 RRS1Q15050 365 aaKnown RBP6.73□□□□□ -1.33
SMAD4-208ENST00000589706 INAVAQ3KP66 663 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 CCDC184Q52MB2 194 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 MUM1L1Q5H9M0 696 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 FAM102BQ5T8I3 360 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 CREB3L3Q68CJ9 461 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 ZPBP2Q6X784 338 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 PRR23CQ6ZRP0 262 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 CLEC17AQ6ZS10 378 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 TMPRSS7Q7RTY8 843 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 CCDC91Q7Z6B0 441 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 CD163Q86VB7 1156 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 TCEAL8Q8IYN2 117 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 OTUD6BQ8N6M0 293 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 EFHBQ8N7U6 833 aa6.73□□□□□ -1.33
SMAD4-208ENST00000589706 TTC8Q8TAM2 541 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms