RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 REEP2Q9BRK0 252 aa24.86■■□□□ 1.57
R3HDM4-205ENST00000589445 TIPINQ9BVW5 301 aa24.86■■□□□ 1.57
R3HDM4-205ENST00000589445 ZHX3Q9H4I2 956 aa24.86■■□□□ 1.57
R3HDM4-205ENST00000589445 IL23AQ9NPF7 189 aa24.86■■□□□ 1.57
R3HDM4-205ENST00000589445 KCND2Q9NZV8 630 aa24.86■■□□□ 1.57
R3HDM4-205ENST00000589445 COL6A3P12111 3177 aa24.86■■□□□ 1.57
R3HDM4-205ENST00000589445 PHKA2P46019 1235 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 TSHZ1Q6ZSZ6 1077 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 TMEM87AQ8NBN3 555 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 TMEM40Q8WWA1 233 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 BSNDQ8WZ55 320 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 IFT74Q96LB3 600 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 IFIH1Q9BYX4 1025 aaKnown RBP24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 GCOM2Q9BZD3 368 aaPredicted RBP24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 OSBPL7Q9BZF2 842 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 UBE2OQ9C0C9 1292 aaKnown RBP24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 ADAMTS10Q9H324 1103 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 HPSEQ9Y251 543 aa24.85■■□□□ 1.57
R3HDM4-205ENST00000589445 FAM13AO94988 1023 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 PFKMP08237 780 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 CD52P31358 61 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 EPHB4P54760 987 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 ARSHQ5FYA8 562 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 RPUSD2Q8IZ73 545 aaKnown RBP24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 ZNF710Q8N1W2 664 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 TNMDQ9H2S6 317 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 MAGEF1Q9HAY2 307 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 SERTAD1Q9UHV2 236 aa24.84■■□□□ 1.57
R3HDM4-205ENST00000589445 ASAP2O43150 1006 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 GADD45BO75293 160 aaPredicted RBP24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 RPS6KA5O75582 802 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 CDC42EP1Q00587 391 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 MAPK7Q13164 816 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 DMP1Q13316 513 aaPredicted RBP24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 PPP2R5AQ15172 486 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 PSRC1Q6PGN9 363 aaPredicted RBP24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 DAW1Q8N136 415 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 DEPTORQ8TB45 409 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 SEPT8Q92599 483 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 KIFC3Q9BVG8 833 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 ODF2LQ9ULJ1 636 aa24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 NOC2LQ9Y3T9 749 aaKnown RBP24.83■■□□□ 1.57
R3HDM4-205ENST00000589445 MYMKA6NI61 221 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 CCDC169A6NNP5 214 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 ACTN4O43707 911 aaKnown RBP24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 PRPF40AO75400 957 aaKnown RBP24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 CSDE1O75534 798 aaKnown RBP24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 DARSP14868 501 aaKnown RBP24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 FGFR4P22455 802 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 AFMP43652 599 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 PEX3P56589 373 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 NFX1Q12986 1120 aaKnown RBP24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 GPNMBQ14956 572 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 CNKSR3Q6P9H4 555 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 ZBTB8OSQ8IWT0 167 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 GRAMD1CQ8IYS0 662 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 DDX12PQ92771 950 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 AGO3Q9H9G7 860 aaKnown RBP24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 A0A0C4DFX4 3053 aa24.82■■□□□ 1.56
R3HDM4-205ENST00000589445 FAM237AA0A1B0GTK4 181 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 SFI1A8K8P3 1242 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 CXCL10P02778 98 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 ACTN1P12814 892 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 IDEP14735 1019 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 LIG1P18858 919 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 SFPQP23246 707 aaKnown RBP eCLIP24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 EIF4BP23588 611 aaKnown RBP24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 NAMPTP43490 491 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 FAM228AQ86W67 206 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 USP38Q8NB14 1042 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 USP25Q9UHP3 1055 aa24.81■■□□□ 1.56
R3HDM4-205ENST00000589445 PTPRSQ13332 1948 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 ZBBXA8MT70 800 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 INO80B-WBP1J3KQ70 363 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 SOX1O00570 391 aaPredicted RBP24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 SLFN14P0C7P3 912 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 ASIC1P78348 528 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 AMPD3Q01432 767 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 FAM160A1Q05DH4 1040 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 GIT2Q14161 759 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 PLEKHG4Q58EX7 1191 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 ZNF365Q70YC5 407 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 OTOP2Q7RTS6 562 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 CNNM3Q8NE01 707 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 DBF4BQ8NFT6 615 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 GDF15Q99988 308 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.8■■□□□ 1.564e-8■□□□□ 8.8
R3HDM4-205ENST00000589445 INO80BQ9C086 356 aaPredicted RBP24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 LRRC27Q9C0I9 530 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 IFT122Q9HBG6 1241 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 KBTBD4Q9NVX7 518 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 PADI3Q9ULW8 664 aa24.8■■□□□ 1.56
R3HDM4-205ENST00000589445 GOLGA6L22H0YM25 854 aa24.79■■□□□ 1.56
R3HDM4-205ENST00000589445 ERLIN2O94905 339 aa24.79■■□□□ 1.56
R3HDM4-205ENST00000589445 PLS3P13797 630 aa24.79■■□□□ 1.56
R3HDM4-205ENST00000589445 UBE2HP62256 183 aa24.79■■□□□ 1.56
R3HDM4-205ENST00000589445 TCTN1Q2MV58 587 aa24.79■■□□□ 1.56
R3HDM4-205ENST00000589445 LONRF3Q496Y0 759 aa24.79■■□□□ 1.56
R3HDM4-205ENST00000589445 ODR4Q5SWX8 454 aa24.79■■□□□ 1.56
R3HDM4-205ENST00000589445 CLEC17AQ6ZS10 378 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms