RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 FOSL2P15408 326 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 PTENP60484 403 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 CMTR2Q8IYT2 770 aaKnown RBP19.53■□□□□ 0.72
H3F3B-207ENST00000589417 CLP1Q92989 425 aaKnown RBP19.53■□□□□ 0.72
H3F3B-207ENST00000589417 NLRP4Q96MN2 994 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 CCDC43Q96MW1 224 aaKnown RBP19.53■□□□□ 0.72
H3F3B-207ENST00000589417 TMEM161AQ9NX61 479 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 KIAA1024Q9UPX6 916 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 PCDHB7Q9Y5E2 793 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 GBF1Q92538 1859 aa19.53■□□□□ 0.72
H3F3B-207ENST00000589417 ADGRA3Q8IWK6 1321 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 EPOPA6NHQ4 379 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 EOMESO95936 686 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 TFDP1Q14186 410 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 PTPAQ15257 358 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 SF3A1Q15459 793 aaKnown RBP19.52■□□□□ 0.72
H3F3B-207ENST00000589417 PADI6Q6TGC4 694 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 SPRED2Q7Z698 418 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 RNF149Q8NC42 400 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 DDX19AQ9NUU7 478 aaKnown RBP19.52■□□□□ 0.72
H3F3B-207ENST00000589417 LMCD1Q9NZU5 365 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 DNM3Q9UQ16 869 aa19.52■□□□□ 0.72
H3F3B-207ENST00000589417 ARHGEF35A5YM69 484 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 VWA3AA6NCI4 1184 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 PP2D1A8MPX8 630 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 C5orf67F2Z3F1 127 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 LPXNO60711 386 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 USO1O60763 962 aaKnown RBP19.51■□□□□ 0.71
H3F3B-207ENST00000589417 CSDE1O75534 798 aaKnown RBP19.51■□□□□ 0.71
H3F3B-207ENST00000589417 EYA4O95677 639 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 SRGAP2CP0DJJ0 459 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 GLRA2P23416 452 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 CDC25AP30304 524 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 PHKA2P46019 1235 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 ZNF598Q86UK7 904 aaKnown RBP19.51■□□□□ 0.71
H3F3B-207ENST00000589417 FIBCD1Q8N539 461 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 ASAP3Q8TDY4 903 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 ARNTL2Q8WYA1 636 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 MINDY3Q9H8M7 445 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 BMP2KQ9NSY1 1161 aaPredicted RBP19.51■□□□□ 0.71
H3F3B-207ENST00000589417 FOXD4L1Q9NU39 408 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 LRFN2Q9ULH4 789 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 RWDD3Q9Y3V2 267 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 TRANK1O15050 2925 aa19.51■□□□□ 0.71
H3F3B-207ENST00000589417 ZNF623O75123 536 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 RB1P06400 928 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 FGFR4P22455 802 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 HOXA11P31270 313 aaPredicted RBP19.5■□□□□ 0.71
H3F3B-207ENST00000589417 LONP1P36776 959 aaKnown RBP19.5■□□□□ 0.71
H3F3B-207ENST00000589417 CAPSQ13938 189 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 EPC2Q52LR7 807 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 ECHDC2Q86YB7 292 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 RSPH1Q8WYR4 309 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 C17orf80Q9BSJ5 609 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 NT5C3AQ9H0P0 336 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 BHMT2Q9H2M3 363 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 CERS4Q9HA82 394 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 AGPAT5Q9NUQ2 364 aa19.5■□□□□ 0.71
H3F3B-207ENST00000589417 HOXA2O43364 376 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 SKIP12755 728 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 BMPR1AP36894 532 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 GRB10Q13322 594 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 BTG3Q14201 252 aaPredicted RBP19.49■□□□□ 0.71
H3F3B-207ENST00000589417 CATSPER4Q7RTX7 472 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 TMEM192Q8IY95 271 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 MAFAQ8NHW3 353 aaPredicted RBP19.49■□□□□ 0.71
H3F3B-207ENST00000589417 PNMA5Q96PV4 448 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 POLR3FQ9H1D9 316 aaPredicted RBP19.49■□□□□ 0.71
H3F3B-207ENST00000589417 DAXXQ9UER7 740 aaPredicted RBP19.49■□□□□ 0.71
H3F3B-207ENST00000589417 CLIC4Q9Y696 253 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 MTCH2Q9Y6C9 303 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 LOXHD1Q8IVV2 1947 aa19.49■□□□□ 0.71
H3F3B-207ENST00000589417 H3BNC9 293 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 RFXAPO00287 272 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 AXLP30530 894 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 AMHR2Q16671 573 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 TMEM119Q4V9L6 283 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 CDCA2Q69YH5 1023 aaPredicted RBP19.48■□□□□ 0.71
H3F3B-207ENST00000589417 KCNK18Q7Z418 384 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 KIFAP3Q92845 792 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 PLVAPQ9BX97 442 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 GPRC5CQ9NQ84 441 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 RNF19AQ9NV58 838 aa19.48■□□□□ 0.71
H3F3B-207ENST00000589417 SRPRBQ9Y5M8 271 aaKnown RBP19.48■□□□□ 0.71
H3F3B-207ENST00000589417 E9PMD0 336 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 ATF7P17544 494 aaPredicted RBP19.47■□□□□ 0.71
H3F3B-207ENST00000589417 RAB27AP51159 221 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 MBTD1Q05BQ5 628 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 SLC39A14Q15043 492 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 FAM187BQ17R55 369 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 NAALADL2Q58DX5 795 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 FAM102BQ5T8I3 360 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 FAM173BQ6P4H8 233 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 C1orf186Q6ZWK4 172 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 SYT2Q8N9I0 419 aaPredicted RBP19.47■□□□□ 0.71
H3F3B-207ENST00000589417 FBXO22Q8NEZ5 403 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 CCDC51Q96ER9 411 aa19.47■□□□□ 0.71
H3F3B-207ENST00000589417 TIPINQ9BVW5 301 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms