RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 SELPP16109 830 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 ABCD1P33897 745 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 RGS19P49795 217 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 GPC3P51654 580 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 ASIC1P78348 528 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 PSMD2Q13200 908 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 DMP1Q13316 513 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-218ENST00000589294 NFKBIBQ15653 356 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 HERC4Q5GLZ8 1057 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-218ENST00000589294 ODR4Q5SWX8 454 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 ZNF618Q5T7W0 954 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-218ENST00000589294 KSR1Q8IVT5 923 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 SPATA20Q8TB22 786 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 ASAP3Q8TDY4 903 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 KCNN1Q92952 543 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
DNMT1-218ENST00000589294 GSDMAQ96QA5 445 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 GCOM2Q9BZD3 368 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-218ENST00000589294 GTPBP4Q9BZE4 634 aaKnown RBP13.45□□□□□ -0.26
DNMT1-218ENST00000589294 INO80BQ9C086 356 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-218ENST00000589294 BLZF1Q9H2G9 400 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 TRPV2Q9Y5S1 764 aa13.45□□□□□ -0.26
DNMT1-218ENST00000589294 PHLPP2Q6ZVD8 1323 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 EVPLQ92817 2033 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-218ENST00000589294 TRAK2O60296 914 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 CHRNA1P02708 482 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 RPN1P04843 607 aaKnown RBP13.44□□□□□ -0.26
DNMT1-218ENST00000589294 PHKA2P46019 1235 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 NPTX2P47972 431 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 EFNA5P52803 228 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 PEX3P56589 373 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 PTENP60484 403 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-218ENST00000589294 MGAT3Q09327 533 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 TMEM62Q0P6H9 643 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 CAPSQ13938 189 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 KCNB1Q14721 858 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 PCBP1Q15365 356 aaKnown RBP eCLIP13.44□□□□□ -0.26
DNMT1-218ENST00000589294 KIZQ2M2Z5 673 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 NT5DC1Q5TFE4 455 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 SRGAP1Q7Z6B7 1085 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 RNF149Q8NC42 400 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 NLRP7Q8WX94 980 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 DPF3Q92784 378 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 C2orf40Q9H1Z8 148 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 ZHX3Q9H4I2 956 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 IFT122Q9HBG6 1241 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 OLFML3Q9NRN5 406 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 PRKAG2Q9UGJ0 569 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 CDY2AQ9Y6F7 541 aa13.44□□□□□ -0.26
DNMT1-218ENST00000589294 ARID2Q68CP9 1835 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 MKI67P46013 3256 aaKnown RBP13.43□□□□□ -0.26
DNMT1-218ENST00000589294 A0A087WZ62 844 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 TRIM43BA6NCK2 446 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 KLRC4O43908 158 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 IQCF3P0C7M6 154 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 DARSP14868 501 aaKnown RBP13.43□□□□□ -0.26
DNMT1-218ENST00000589294 RAG1P15918 1043 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 EIF4BP23588 611 aaKnown RBP13.43□□□□□ -0.26
DNMT1-218ENST00000589294 CASP1P29466 404 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 RFC2P35250 354 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 SARSP49591 514 aaKnown RBP13.43□□□□□ -0.26
DNMT1-218ENST00000589294 EHHADHQ08426 723 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 PNOCQ13519 176 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 CAMK4Q16566 473 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 CDCA2Q69YH5 1023 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-218ENST00000589294 TRAF7Q6Q0C0 670 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 LRRC8DQ7L1W4 858 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 ZNF720Q7Z2F6 126 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 FAM178BQ8IXR5 827 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 DEPTORQ8TB45 409 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 SMARCE1Q969G3 411 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-218ENST00000589294 TRIM43Q96BQ3 446 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-218ENST00000589294 NLRP4Q96MN2 994 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 FDXACB1Q9BRP7 624 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-218ENST00000589294 NUP62CLQ9H1M0 184 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 ST6GALNAC4Q9H4F1 302 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 TMEM134Q9H6X4 195 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 CDHR5Q9HBB8 845 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 KMT5AQ9NQR1 393 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 RMND1Q9NWS8 449 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 KIAA1468Q9P260 1216 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 PCDHA5Q9Y5H7 936 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 NR2E3Q9Y5X4 410 aa13.43□□□□□ -0.26
DNMT1-218ENST00000589294 LRRIQ4A6NIV6 560 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 K7ERI5 159 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 RHOBTB3O94955 611 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 NCKAP1LP55160 1127 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 COASYQ13057 564 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 ALCAMQ13740 583 aa13.42□□□□□ -0.26
DNMT1-218ENST00000589294 KMT5BQ4FZB7 885 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms