RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 C22orf31O95567 290 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 F2P00734 622 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 NR3C1P04150 777 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 MARSP56192 900 aaKnown RBP28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 CACNB2Q08289 660 aaPredicted RBP28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 PTPN21Q16825 1174 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 FILIP1LQ4L180 1135 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 MAP4K3Q8IVH8 894 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 AP5M1Q9H0R1 490 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 AGPAT3Q9NRZ7 376 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 KCNG1Q9UIX4 513 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 TBX20Q9UMR3 447 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 DENND3A2RUS2 1198 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 N4BP3O15049 544 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 CETN3O15182 167 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 PTMAP06454 111 aaKnown RBP28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 HOXD10P28358 340 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 PBX1P40424 430 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 NAMPTP43490 491 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 CPT1AP50416 773 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 IER5Q5VY09 327 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 HS2ST1Q7LGA3 356 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 KAT2BQ92831 832 aa28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 JPH2Q9BR39 696 aaPredicted RBP28.6■■■□□ 2.17
SCAMP4-210ENST00000588555 SIP14410 1827 aa28.59■■■□□ 2.17
SCAMP4-210ENST00000588555 CLIC2O15247 247 aa28.59■■■□□ 2.17
SCAMP4-210ENST00000588555 GNRH1P01148 92 aa28.59■■■□□ 2.17
SCAMP4-210ENST00000588555 ELNP15502 786 aa28.59■■■□□ 2.17
SCAMP4-210ENST00000588555 PPP2R5AQ15172 486 aa28.59■■■□□ 2.17
SCAMP4-210ENST00000588555 TMC6Q7Z403 805 aa28.59■■■□□ 2.17
SCAMP4-210ENST00000588555 LRRC71Q8N4P6 559 aa28.59■■■□□ 2.17
SCAMP4-210ENST00000588555 GOLGA5Q8TBA6 731 aa28.59■■■□□ 2.17
SCAMP4-210ENST00000588555 LGALS16A8MUM7 142 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 GNA14O95837 355 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 MTIF2P46199 727 aaKnown RBP28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 HS1BP3Q53T59 392 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 MIIPQ5JXC2 388 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 TAS1R3Q7RTX0 852 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 SYCP3Q8IZU3 236 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 TMEM174Q8WUU8 243 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 TCP11Q8WWU5 503 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 PRPF31Q8WWY3 499 aaKnown RBP28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 SUGCTQ9HAC7 445 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 DMAC2Q9NW81 257 aa28.58■■■□□ 2.17
SCAMP4-210ENST00000588555 GOLGA6L6A8MZA4 724 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 H0YCG3 227 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 SEPT4O43236 478 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 RPL13P26373 211 aaKnown RBP28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 CAPSQ13938 189 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 ZNF296Q8WUU4 475 aaPredicted RBP28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 ZBTB10Q96DT7 871 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 ERO1AQ96HE7 468 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 FKTNO75072 461 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 PRKCSHP14314 528 aaPredicted RBP28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 BEX3Q00994 111 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 CCDC186Q7Z3E2 898 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 SLC9A9Q8IVB4 645 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 LINC01465Q8N7H1 131 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 TRIM44Q96DX7 344 aaPredicted RBP28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 IMPACTQ9P2X3 320 aa28.57■■■□□ 2.16
SCAMP4-210ENST00000588555 AKAP3O75969 853 aa28.56■■■□□ 2.16
SCAMP4-210ENST00000588555 SCP2P22307 547 aa28.56■■■□□ 2.16
SCAMP4-210ENST00000588555 GJA9P57773 515 aa28.56■■■□□ 2.16
SCAMP4-210ENST00000588555 IGBP1P78318 339 aa28.56■■■□□ 2.16
SCAMP4-210ENST00000588555 FSCN1Q16658 493 aaKnown RBP28.56■■■□□ 2.16
SCAMP4-210ENST00000588555 PSPC1Q8WXF1 523 aaKnown RBP28.56■■■□□ 2.16
SCAMP4-210ENST00000588555 CGNQ9P2M7 1197 aaKnown RBP28.56■■■□□ 2.16
SCAMP4-210ENST00000588555 TISP43B9A030 160 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 SLC16A3O15427 465 aaKnown RBP28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 ADCY3O60266 1144 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 PRKAR2AP13861 404 aaKnown RBP28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 KLRC1P26715 233 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 ABCD1P33897 745 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 PPFIA1Q13136 1202 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 MAN2A1Q16706 1144 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 BRDTQ58F21 947 aaPredicted RBP28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 EFCAB12Q6NXP0 572 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 TRIM59Q8IWR1 403 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 C12orf56Q8IXR9 622 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 NOC4LQ9BVI4 516 aaKnown RBP28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 UPF3AQ9H1J1 476 aaKnown RBP28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 LRRIQ4A6NIV6 560 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 HAS3O00219 553 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 MAGEB2O15479 319 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 CASP4P49662 377 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 SNRPFP62306 86 aaKnown RBP28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 LAMTOR4Q0VGL1 99 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 MYBPC2Q14324 1141 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 MXD4Q14582 209 aaPredicted RBP28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 GRIK4Q16099 956 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 CCDC40Q4G0X9 1142 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 MARCH8Q5T0T0 291 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 MAP3K21Q5TCX8 1036 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 SPECC1LQ69YQ0 1117 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 SUCLA2Q9P2R7 463 aaPredicted RBP28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 EXOC7Q9UPT5 735 aa28.55■■■□□ 2.16
SCAMP4-210ENST00000588555 EVPLQ92817 2033 aa28.54■■■□□ 2.16
SCAMP4-210ENST00000588555 MYADML2A6NDP7 307 aa28.54■■■□□ 2.16
SCAMP4-210ENST00000588555 HMGCRP04035 888 aa28.54■■■□□ 2.16
SCAMP4-210ENST00000588555 CNGA1P29973 690 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms