RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 CATSPER4Q7RTX7 472 aa9.87□□□□□ -0.83
SDF2-207ENST00000588472 EXOC8Q8IYI6 725 aa9.87□□□□□ -0.83
SDF2-207ENST00000588472 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
SDF2-207ENST00000588472 PSPC1Q8WXF1 523 aaKnown RBP9.87□□□□□ -0.83
SDF2-207ENST00000588472 ZNF689Q96CS4 500 aaPredicted RBP9.87□□□□□ -0.83
SDF2-207ENST00000588472 MTRQ99707 1265 aa9.87□□□□□ -0.83
SDF2-207ENST00000588472 HSD17B14Q9BPX1 270 aa9.87□□□□□ -0.83
SDF2-207ENST00000588472 ALG13Q9NP73 1137 aaKnown RBP9.87□□□□□ -0.83
SDF2-207ENST00000588472 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
SDF2-207ENST00000588472 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.87□□□□□ -0.83
SDF2-207ENST00000588472 PCDHB6Q9Y5E3 794 aa9.87□□□□□ -0.83
SDF2-207ENST00000588472 COL4A3BPQ9Y5P4 624 aa9.87□□□□□ -0.83
SDF2-207ENST00000588472 H3BNC9 293 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 GRM6O15303 877 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 USO1O60763 962 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 MED24O75448 989 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 POU3F3P20264 500 aaPredicted RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 SFPQP23246 707 aaKnown RBP eCLIP9.86□□□□□ -0.83
SDF2-207ENST00000588472 U2AF2P26368 475 aaKnown RBP eCLIP9.86□□□□□ -0.83
SDF2-207ENST00000588472 TTC3P53804 2025 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 FAM189BP81408 668 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 PTGDRQ13258 359 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 ZRSR1Q15695 479 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 PTPROQ16827 1216 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 LARP1BQ659C4 914 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 TWF2Q6IBS0 349 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 POTEGQ6S5H5 508 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 CATSPER3Q86XQ3 398 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 ECHDC2Q86YB7 292 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 CMTR2Q8IYT2 770 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 ABI1Q8IZP0 508 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 CRIPAKQ8N1N5 446 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 RNF149Q8NC42 400 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 ERMNQ8TAM6 284 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 NEK9Q8TD19 979 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 TCP11Q8WWU5 503 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 HLA-CQ95604 372 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 MRPL38Q96DV4 380 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 INO80BQ9C086 356 aaPredicted RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 DHX33Q9H6R0 707 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 ANKEF1Q9NU02 776 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 TMEM161AQ9NX61 479 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 HCSTQ9UBK5 93 aa9.86□□□□□ -0.83
SDF2-207ENST00000588472 PIN4Q9Y237 131 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 PRRC2BQ5JSZ5 2229 aaKnown RBP9.86□□□□□ -0.83
SDF2-207ENST00000588472 VPS37CA5D8V6 355 aaPredicted RBP9.85□□□□□ -0.83
SDF2-207ENST00000588472 GPR37L1O60883 481 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 RB1P06400 928 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 SPATA31C1P0DKV0 1188 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 CCT6AP40227 531 aaKnown RBP9.85□□□□□ -0.83
SDF2-207ENST00000588472 TRAPPC10P48553 1259 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 FERMT3Q86UX7 667 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 ZNF410Q86VK4 478 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 C4orf32Q8N8J7 132 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 KLHL23Q8NBE8 558 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 CLP1Q92989 425 aaKnown RBP9.85□□□□□ -0.83
SDF2-207ENST00000588472 LPPQ93052 612 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 C11orf84Q9BUA3 381 aaPredicted RBP9.85□□□□□ -0.83
SDF2-207ENST00000588472 IGFLR1Q9H665 355 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 MINDY3Q9H8M7 445 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 RC3H2Q9HBD1 1191 aaKnown RBP9.85□□□□□ -0.83
SDF2-207ENST00000588472 IFT122Q9HBG6 1241 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 POLD4Q9HCU8 107 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 TUFT1Q9NNX1 390 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 GPRC5CQ9NQ84 441 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 TYW1Q9NV66 732 aaKnown RBP9.85□□□□□ -0.83
SDF2-207ENST00000588472 DACT1Q9NYF0 836 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 LMCD1Q9NZU5 365 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 LRWD1Q9UFC0 647 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 RWDD3Q9Y3V2 267 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 PPME1Q9Y570 386 aa9.85□□□□□ -0.83
SDF2-207ENST00000588472 ARHGEF35A5YM69 484 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 PP2D1A8MPX8 630 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 INO80B-WBP1J3KQ70 363 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 GAS2O43903 313 aaKnown RBP9.84□□□□□ -0.83
SDF2-207ENST00000588472 DGAT1O75907 488 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 LYPLA2O95372 231 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 LINC00271P0C7V0 271 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 CDC25AP30304 524 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 PHKA2P46019 1235 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 RARRES1P49788 294 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 ORC2Q13416 577 aaPredicted RBP9.84□□□□□ -0.83
SDF2-207ENST00000588472 TFDP1Q14186 410 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 TCEAL5Q5H9L2 206 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 DTHD1Q6ZMT9 781 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 ALYREFQ86V81 257 aaKnown RBP9.84□□□□□ -0.83
SDF2-207ENST00000588472 HELQQ8TDG4 1101 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 ASAP3Q8TDY4 903 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 MICAL1Q8TDZ2 1067 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 NACC1Q96RE7 527 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 POLR3CQ9BUI4 534 aaPredicted RBP9.84□□□□□ -0.83
SDF2-207ENST00000588472 POLR3FQ9H1D9 316 aaPredicted RBP9.84□□□□□ -0.83
SDF2-207ENST00000588472 ELAC1Q9H777 363 aaKnown RBP9.84□□□□□ -0.83
SDF2-207ENST00000588472 XPNPEP1Q9NQW7 623 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 AAASQ9NRG9 546 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 PLAGL2Q9UPG8 496 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 KIAA1024Q9UPX6 916 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 INPP5FQ9Y2H2 1132 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 PCDHB12Q9Y5F1 795 aa9.84□□□□□ -0.83
SDF2-207ENST00000588472 NLRC5Q86WI3 1866 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms