RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 FAM20AQ96MK3 541 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 CLIC6Q96NY7 704 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 INPP4AQ96PE3 977 aaPredicted RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 MTMR9Q96QG7 549 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 TINF2Q9BSI4 451 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 TEKT3Q9BXF9 490 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 GSX2Q9BZM3 304 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 CSRNP2Q9H175 543 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 AGO4Q9HCK5 861 aaKnown RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 VTA1Q9NP79 307 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 KCNMB3Q9NPA1 279 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 TBC1D22BQ9NU19 505 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 LMBRD1Q9NUN5 540 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 ZHX1Q9UKY1 873 aaPredicted RBP5.96□□□□□ -1.46
LIG3-210ENST00000588109 ZSWIM8A7E2V4 1837 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 SYNGAP1Q96PV0 1343 aa5.96□□□□□ -1.46
LIG3-210ENST00000588109 A0A1W2PQ27 194 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 A0A1W2PQ64 194 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 A0A1W2PQD8 194 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 LRRC37A2A6NM11 1700 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 PIK3R2O00459 728 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SORBS3O60504 671 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 XYLBO75191 536 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 FAM13AO94988 1023 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 ARHGEF15O94989 841 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SNAI1O95863 264 aaPredicted RBP5.95□□□□□ -1.46
LIG3-210ENST00000588109 MBD3O95983 291 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 HOXC6P09630 235 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 TXNP10599 105 aaKnown RBP5.95□□□□□ -1.46
LIG3-210ENST00000588109 XRCC5P13010 732 aaKnown RBP5.95□□□□□ -1.46
LIG3-210ENST00000588109 ICAM3P32942 547 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 CYP2C19P33261 490 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SCNN1AP37088 669 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SP4Q02446 784 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 GRIN1Q05586 938 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 ACVR2BQ13705 512 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 TTLL4Q14679 1199 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 PCSK7Q16549 785 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 IL17AQ16552 155 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 CCL14Q16627 93 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SPECC1Q5M775 1068 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 MFSD14CQ5VZR4 134 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 RESP18Q5W5W9 173 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 KRT79Q5XKE5 535 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 OLFML2BQ68BL8 750 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 HAUS3Q68CZ6 603 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SHC4Q6S5L8 630 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 MAMDC4Q6UXC1 1216 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 ETFBKMTQ8IXQ9 262 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 DNAJC5GQ8N7S2 189 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 GIMAP8Q8ND71 665 aaPredicted RBP5.95□□□□□ -1.46
LIG3-210ENST00000588109 MORC4Q8TE76 937 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SNX29Q8TEQ0 813 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SCFD2Q8WU76 684 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 USP6NLQ92738 828 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 CALML4Q96GE6 196 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 CDK5RAP3Q96JB5 506 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 AK8Q96MA6 479 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 RIT2Q99578 217 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 ABHD16BQ9H3Z7 469 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 JPH1Q9HDC5 661 aaPredicted RBP5.95□□□□□ -1.46
LIG3-210ENST00000588109 LRWD1Q9UFC0 647 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 CCDC39Q9UFE4 941 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SRRDQ9UH36 339 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 GJD2Q9UKL4 321 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 GABRQQ9UN88 632 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 USP20Q9Y2K6 914 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 SAMM50Q9Y512 469 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 TRIM17Q9Y577 477 aa5.95□□□□□ -1.46
LIG3-210ENST00000588109 MORC2Q9Y6X9 1032 aaPredicted RBP5.95□□□□□ -1.46
LIG3-210ENST00000588109 ELOA3CA0A087WX78 387 aaPredicted RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 A0A1B0GVL5 298 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 ELOA3DA6NLF2 546 aaPredicted RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 PP2D1A8MPX8 630 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 WDR64B1ANS9 1081 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 RNF225M0QZC1 329 aaPredicted RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 NOP56O00567 594 aaKnown RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 TNFRSF10BO14763 440 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 KINO60870 393 aaKnown RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 ATP9AO75110 1047 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 PSMD10O75832 226 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 SASH3O75995 380 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 GGPS1O95749 300 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 RPLP1P05386 114 aaKnown RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 TGFB3P10600 412 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 ELNP15502 786 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 PFKFB1P16118 471 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 KCNA2P16389 499 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 NFKB1P19838 968 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 UBA1P22314 1058 aaKnown RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 CMA1P23946 247 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 CNGA1P29973 690 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 CDC25AP30304 524 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 CCT6AP40227 531 aaKnown RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 ADCYAP1R1P41586 468 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 JAK3P52333 1124 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 PRMT2P55345 433 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 ITGB3BPQ13352 177 aaPredicted RBP5.94□□□□□ -1.46
LIG3-210ENST00000588109 PPP2R5CQ13362 524 aa5.94□□□□□ -1.46
LIG3-210ENST00000588109 NEDD9Q14511 834 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms