RNA–Protein interactions for RNA: ENST00000587958.1

GRN-210, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-210ENST00000587958 ECHDC2Q86YB7 292 aa16.69■□□□□ 0.26
GRN-210ENST00000587958 RNF149Q8NC42 400 aa16.69■□□□□ 0.26
GRN-210ENST00000587958 PLIN2Q99541 437 aa16.69■□□□□ 0.26
GRN-210ENST00000587958 MMTAG2Q9BU76 263 aaKnown RBP16.69■□□□□ 0.26
GRN-210ENST00000587958 ANKEF1Q9NU02 776 aa16.69■□□□□ 0.26
GRN-210ENST00000587958 USP20Q9Y2K6 914 aa16.69■□□□□ 0.26
GRN-210ENST00000587958 PCDHGC5Q9Y5F6 944 aa16.69■□□□□ 0.26
GRN-210ENST00000587958 BRWD1Q9NSI6 2320 aa16.69■□□□□ 0.26
GRN-210ENST00000587958 POU3F3P20264 500 aaPredicted RBP16.68■□□□□ 0.26
GRN-210ENST00000587958 GLRA2P23416 452 aa16.68■□□□□ 0.26
GRN-210ENST00000587958 BMPR1AP36894 532 aa16.68■□□□□ 0.26
GRN-210ENST00000587958 CCT6AP40227 531 aaKnown RBP16.68■□□□□ 0.26
GRN-210ENST00000587958 PBX3P40426 434 aa16.68■□□□□ 0.26
GRN-210ENST00000587958 TRAPPC10P48553 1259 aa16.68■□□□□ 0.26
GRN-210ENST00000587958 FXR2P51116 673 aaKnown RBP eCLIP16.68■□□□□ 0.266e-7■■■■□ 20.6
GRN-210ENST00000587958 GRIN1Q05586 938 aa16.68■□□□□ 0.26
GRN-210ENST00000587958 CLLU1OSQ5K130 101 aa16.68■□□□□ 0.26
GRN-210ENST00000587958 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
GRN-210ENST00000587958 PSPC1Q8WXF1 523 aaKnown RBP16.68■□□□□ 0.26
GRN-210ENST00000587958 BSNDQ8WZ55 320 aa16.68■□□□□ 0.26
GRN-210ENST00000587958 POLR3CQ9BUI4 534 aaPredicted RBP16.68■□□□□ 0.26
GRN-210ENST00000587958 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.68■□□□□ 0.26
GRN-210ENST00000587958 VPS37CA5D8V6 355 aaPredicted RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 E9PMD0 336 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 H3BNC9 293 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 GTPBP6O43824 516 aaPredicted RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 STAG3L1P0CL83 205 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 RPA1P27694 616 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 ARL2P36404 184 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 AFF1P51825 1210 aaKnown RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 CAPSQ13938 189 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 CAMK1Q14012 370 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 CATSPER4Q7RTX7 472 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 CDR2LQ86X02 465 aaPredicted RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 CMTR2Q8IYT2 770 aaKnown RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 NEK9Q8TD19 979 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 CLP1Q92989 425 aaKnown RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 CPB2Q96IY4 423 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 CASD1Q96PB1 797 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 POLR3FQ9H1D9 316 aaPredicted RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 TUFT1Q9NNX1 390 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 C1orf112Q9NSG2 853 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 TYW1Q9NV66 732 aaKnown RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 LRWD1Q9UFC0 647 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 KIAA1024Q9UPX6 916 aa16.67■□□□□ 0.26
GRN-210ENST00000587958 PIN4Q9Y237 131 aaKnown RBP16.67■□□□□ 0.26
GRN-210ENST00000587958 MYH11P35749 1972 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 TTLL13PA6NNM8 815 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 ITGB1P05556 798 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 ZSCAN20P17040 1043 aaPredicted RBP16.66■□□□□ 0.26
GRN-210ENST00000587958 GTF2F1P35269 517 aaKnown RBP eCLIP16.66■□□□□ 0.26
GRN-210ENST00000587958 ZRSR1Q15695 479 aaKnown RBP16.66■□□□□ 0.26
GRN-210ENST00000587958 UBXN11Q5T124 520 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 ZNF598Q86UK7 904 aaKnown RBP16.66■□□□□ 0.26
GRN-210ENST00000587958 ZNF410Q86VK4 478 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 IGSF22Q8N9C0 903 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 KLHL23Q8NBE8 558 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 HELQQ8TDG4 1101 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 SNX29Q8TEQ0 813 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 COL25A1Q9BXS0 654 aaPredicted RBP16.66■□□□□ 0.26
GRN-210ENST00000587958 CWH43Q9H720 699 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 ATP6V0A4Q9HBG4 840 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 DDX19AQ9NUU7 478 aaKnown RBP16.66■□□□□ 0.26
GRN-210ENST00000587958 TMEM161AQ9NX61 479 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
GRN-210ENST00000587958 VWA3AA6NCI4 1184 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 K7ELQ4 463 aaPredicted RBP16.65■□□□□ 0.26
GRN-210ENST00000587958 B4GALT5O43286 388 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 SYT1P21579 422 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 HOXA11P31270 313 aaPredicted RBP16.65■□□□□ 0.26
GRN-210ENST00000587958 IRS1P35568 1242 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 KCNQ1P51787 676 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 ATP2C1P98194 919 aaPredicted RBP16.65■□□□□ 0.26
GRN-210ENST00000587958 ORC2Q13416 577 aaPredicted RBP16.65■□□□□ 0.26
GRN-210ENST00000587958 ODR4Q5SWX8 454 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 TWF2Q6IBS0 349 aaKnown RBP16.65■□□□□ 0.26
GRN-210ENST00000587958 PADI6Q6TGC4 694 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 LRRC15Q8TF66 581 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 PNMA5Q96PV4 448 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 JPH2Q9BR39 696 aaPredicted RBP16.65■□□□□ 0.26
GRN-210ENST00000587958 BHMT2Q9H2M3 363 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 PLAGL2Q9UPG8 496 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 XIRP2A4UGR9 3374 aa16.65■□□□□ 0.26
GRN-210ENST00000587958 A0A0U1RQF3 1178 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 C5orf67F2Z3F1 127 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 B4GALT3O60512 393 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 DGAT1O75907 488 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 EDN1P05305 212 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 PHKA2P46019 1235 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 PTENP60484 403 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 RILPL1Q5EBL4 403 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 TCEAL5Q5H9L2 206 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 SPOUT1Q5T280 376 aaKnown RBP16.64■□□□□ 0.25
GRN-210ENST00000587958 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
GRN-210ENST00000587958 DTHD1Q6ZMT9 781 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 ERMNQ8TAM6 284 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 SPPL3Q8TCT6 385 aa16.64■□□□□ 0.25
GRN-210ENST00000587958 TCP11Q8WWU5 503 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms