RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 TUBGCP5Q96RT8 1024 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 SLC6A15Q9H2J7 730 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 DENND2AQ9ULE3 1009 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 ADCY10Q96PN6 1610 aa6.13□□□□□ -1.43
VMP1-205ENST00000587470 PLSCR1O15162 318 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 SUV39H1O43463 412 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 SLC9A1P19634 815 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 HIBADHP31937 336 aaKnown RBP6.12□□□□□ -1.43
VMP1-205ENST00000587470 ADCY7P51828 1080 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 BCAR1P56945 870 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 ANTXR2P58335 489 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 MIIPQ5JXC2 388 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 KIF18BQ86Y91 864 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 HOMER1Q86YM7 354 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 ZNF808Q8N4W9 903 aaPredicted RBP6.12□□□□□ -1.43
VMP1-205ENST00000587470 OR5AN1Q8NGI8 311 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 RPGRQ92834 1020 aaKnown RBP6.12□□□□□ -1.43
VMP1-205ENST00000587470 EXTL1Q92935 676 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 GCDHQ92947 438 aaPredicted RBP6.12□□□□□ -1.43
VMP1-205ENST00000587470 SLC7A6OSQ96CW6 309 aaPredicted RBP6.12□□□□□ -1.43
VMP1-205ENST00000587470 ZNF503Q96F45 646 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 RNPC3Q96LT9 517 aaKnown RBP6.12□□□□□ -1.43
VMP1-205ENST00000587470 ELF4Q99607 663 aaPredicted RBP6.12□□□□□ -1.43
VMP1-205ENST00000587470 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 PIF1Q9H611 641 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 AGO3Q9H9G7 860 aaKnown RBP6.12□□□□□ -1.43
VMP1-205ENST00000587470 MAGEL2Q9UJ55 1249 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 ZKSCAN5Q9Y2L8 839 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 SPO11Q9Y5K1 396 aa6.12□□□□□ -1.43
VMP1-205ENST00000587470 ABCA5Q8WWZ7 1642 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 GLI2P10070 1586 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 TEX14Q8IWB6 1497 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 C2orf78A6NCI8 922 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 ATP2C1P98194 919 aaPredicted RBP6.11□□□□□ -1.43
VMP1-205ENST00000587470 RIN1Q13671 783 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 PRAMEF9Q5VWM5 478 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 BMP8AQ7Z5Y6 402 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 SGMS1Q86VZ5 419 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 C1orf210Q8IVY1 113 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 D2HGDHQ8N465 521 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 MPHOSPH9Q99550 1183 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 ZNF341Q9BYN7 854 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 IFT57Q9NWB7 429 aa6.11□□□□□ -1.43
VMP1-205ENST00000587470 PPRC1Q5VV67 1664 aaKnown RBP6.1□□□□□ -1.43
VMP1-205ENST00000587470 PCF11O94913 1555 aaKnown RBP6.1□□□□□ -1.43
VMP1-205ENST00000587470 PTPRMP28827 1452 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 PLB1Q6P1J6 1458 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 MAFGO15525 162 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 ACRV1P26436 265 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 TIGD7Q6NT04 549 aaPredicted RBP6.1□□□□□ -1.43
VMP1-205ENST00000587470 C16orf86Q6ZW13 317 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 PHYKPLQ8IUZ5 450 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 ZZZ3Q8IYH5 903 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 NKD2Q969F2 451 aaPredicted RBP6.1□□□□□ -1.43
VMP1-205ENST00000587470 TMEM176AQ96HP8 235 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 TLR9Q9NR96 1032 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 AURKAIP1Q9NWT8 199 aaPredicted RBP6.1□□□□□ -1.43
VMP1-205ENST00000587470 OXSMQ9NWU1 459 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 CD2APQ9Y5K6 639 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 RBM8AQ9Y5S9 174 aaKnown RBP6.1□□□□□ -1.43
VMP1-205ENST00000587470 HS3ST3A1Q9Y663 406 aa6.1□□□□□ -1.43
VMP1-205ENST00000587470 RUSC2Q8N2Y8 1516 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 FHAD1B1AJZ9 1412 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 KIF27Q86VH2 1401 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 A0A1W2PRX2 142 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 GAS7O60861 476 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 F2P00734 622 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 ATP2A2P16615 1042 aaKnown RBP6.09□□□□□ -1.43
VMP1-205ENST00000587470 POU3F2P20265 443 aaPredicted RBP6.09□□□□□ -1.43
VMP1-205ENST00000587470 NEK4P51957 841 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 SAFB2Q14151 953 aaKnown RBP eCLIP6.09□□□□□ -1.43
VMP1-205ENST00000587470 MYBPC3Q14896 1274 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 CREB3L3Q68CJ9 461 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 KANSL1Q7Z3B3 1105 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 ZFPM1Q8IX07 1006 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 THEMISQ8N1K5 641 aaPredicted RBP6.09□□□□□ -1.43
VMP1-205ENST00000587470 APPBP2Q92624 585 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 DYDC2Q96IM9 177 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 RPL10LQ96L21 214 aaKnown RBP6.09□□□□□ -1.43
VMP1-205ENST00000587470 WDR92Q96MX6 357 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 SYNPO2Q9UMS6 1093 aa6.09□□□□□ -1.43
VMP1-205ENST00000587470 GOLGA8BA8MQT2 603 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 NPIPB8E9PQR5 432 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 CYP27B1O15528 508 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 DAPK3O43293 454 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 STAT3P40763 770 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 HMGA2P52926 109 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 HSPA2P54652 639 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 BPIFB4P59827 614 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 ADCY2Q08462 1091 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 TCIRG1Q13488 830 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 ACAP1Q15027 740 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 GAGE13Q4V321 117 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 ESRP1Q6NXG1 681 aaKnown RBP6.08□□□□□ -1.44
VMP1-205ENST00000587470 LRRTM3Q86VH5 581 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 C7orf31Q8N865 590 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 ANKRD53Q8N9V6 530 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 PLA2G15Q8NCC3 412 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 IL17DQ8TAD2 202 aa6.08□□□□□ -1.44
VMP1-205ENST00000587470 NINJ1Q92982 152 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms