RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 CFAP54Q96N23 3096 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 TMEM150BA6NC51 233 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 CHMP2AO43633 222 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 CA8P35219 290 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 ALDH7A1P49419 539 aaKnown RBP18.42■□□□□ 0.54
NPC1-205ENST00000587163 FGD1P98174 961 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 TBC1D8BQ0IIM8 1120 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 MTMR3Q13615 1198 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 RARS2Q5T160 578 aaKnown RBP18.42■□□□□ 0.54
NPC1-205ENST00000587163 UBALD2Q8IYN6 164 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 VPS52Q8N1B4 723 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 SLC5A5Q92911 643 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 BRF1Q92994 677 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 LPPQ93052 612 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 SNX27Q96L92 541 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 NECTIN4Q96NY8 510 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 CEP89Q96ST8 783 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 UNC45AQ9H3U1 944 aa18.42■□□□□ 0.54
NPC1-205ENST00000587163 MYO15AQ9UKN7 3530 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 GALR2O43603 387 aaPredicted RBP18.41■□□□□ 0.54
NPC1-205ENST00000587163 GAS7O60861 476 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 STBD1O95210 358 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 ASGR2P07307 311 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 HMGB1P09429 215 aaKnown RBP18.41■□□□□ 0.54
NPC1-205ENST00000587163 MTHFRP42898 656 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 PHKA2P46019 1235 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 NTRK3Q16288 839 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 TMEM105Q8N8V8 129 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 RIT2Q99578 217 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 SH2D3AQ9BRG2 576 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 MRPL9Q9BYD2 267 aaKnown RBP18.41■□□□□ 0.54
NPC1-205ENST00000587163 ZBP1Q9H171 429 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 IRF2BPLQ9H1B7 796 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 DACT1Q9NYF0 836 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 LIMD1Q9UGP4 676 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 PLXNA3P51805 1871 aa18.41■□□□□ 0.54
NPC1-205ENST00000587163 A0A087WZ62 844 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.4■□□□□ 0.54
NPC1-205ENST00000587163 MEIS3P2A8K0S8 358 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 ZC3H11AO75152 810 aaKnown RBP eCLIP18.4■□□□□ 0.54
NPC1-205ENST00000587163 EPCAMP16422 314 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 USP11P51784 963 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 LRCH2Q5VUJ6 765 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 BICD2Q8TD16 824 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 SLC22A17Q8WUG5 538 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 BCL7CQ8WUZ0 217 aaPredicted RBP18.4■□□□□ 0.54
NPC1-205ENST00000587163 TMEM169Q96HH4 297 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 FDXACB1Q9BRP7 624 aaPredicted RBP18.4■□□□□ 0.54
NPC1-205ENST00000587163 NIFKQ9BYG3 293 aaKnown RBP18.4■□□□□ 0.54
NPC1-205ENST00000587163 GCOM2Q9BZD3 368 aaPredicted RBP18.4■□□□□ 0.54
NPC1-205ENST00000587163 VPS54Q9P1Q0 977 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 NID2Q14112 1375 aa18.4■□□□□ 0.54
NPC1-205ENST00000587163 IGKV6-21A0A0C4DH24 114 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 PSMD10O75832 226 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 SFNP31947 248 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 JAK3P52333 1124 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 NUBP1P53384 320 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 MTERF2Q49AM1 385 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 KCNB2Q92953 911 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 IGSF21Q96ID5 467 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
NPC1-205ENST00000587163 TEKT3Q9BXF9 490 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 NRDE2Q9H7Z3 1164 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 CHST12Q9NRB3 414 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 TBC1D13Q9NVG8 400 aa18.39■□□□□ 0.53
NPC1-205ENST00000587163 B4GALT3O60512 393 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 GALTP07902 379 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 CTSAP10619 480 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 AKAP17AQ02040 695 aaKnown RBP18.38■□□□□ 0.53
NPC1-205ENST00000587163 BMS1Q14692 1282 aaKnown RBP18.38■□□□□ 0.53
NPC1-205ENST00000587163 ATAT1Q5SQI0 421 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 TWF2Q6IBS0 349 aaKnown RBP18.38■□□□□ 0.53
NPC1-205ENST00000587163 KIAA1841Q6NSI8 718 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 DDX53Q86TM3 631 aaKnown RBP18.38■□□□□ 0.53
NPC1-205ENST00000587163 KSR1Q8IVT5 923 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 ZDHHC14Q8IZN3 488 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 TRAIPQ9BWF2 469 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 VN1R3Q9BXE9 311 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 SLC26A6Q9BXS9 759 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 DNAJB4Q9UDY4 337 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 SEPT9Q9UHD8 586 aaPredicted RBP18.38■□□□□ 0.53
NPC1-205ENST00000587163 DBR1Q9UK59 544 aaKnown RBP18.38■□□□□ 0.53
NPC1-205ENST00000587163 IRAK3Q9Y616 596 aa18.38■□□□□ 0.53
NPC1-205ENST00000587163 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 OFD1O75665 1012 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 POLGP54098 1239 aaPredicted RBP18.37■□□□□ 0.53
NPC1-205ENST00000587163 XKR3Q5GH77 459 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 NOMO2Q5JPE7 1267 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 B3GNT9Q6UX72 402 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 TMC5Q6UXY8 1006 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 ASCL5Q7RTU5 278 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 MIER3Q7Z3K6 550 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 TDRD5Q8NAT2 981 aaKnown RBP18.37■□□□□ 0.53
NPC1-205ENST00000587163 TBCKQ8TEA7 893 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 RNF26Q9BY78 433 aaPredicted RBP18.37■□□□□ 0.53
NPC1-205ENST00000587163 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
NPC1-205ENST00000587163 FAM105AQ9NUU6 356 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 DZANK1Q9NVP4 752 aa18.37■□□□□ 0.53
NPC1-205ENST00000587163 SUCLA2Q9P2R7 463 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms