RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 COL9A1P20849 921 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 GTF2F1P35269 517 aaKnown RBP eCLIP18.99■□□□□ 0.63
TRIM47-203ENST00000586495 RFC5P40937 340 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 NDUFV1P49821 464 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 POLGP54098 1239 aaPredicted RBP18.99■□□□□ 0.63
TRIM47-203ENST00000586495 NPEPPSP55786 919 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 ADGRD2Q7Z7M1 963 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 EFHBQ8N7U6 833 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 RSPH1Q8WYR4 309 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 NLRP4Q96MN2 994 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 LXNQ9BS40 222 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 EPHX3Q9H6B9 360 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 ZSWIM4Q9H7M6 989 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 CD320Q9NPF0 282 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 RNF19AQ9NV58 838 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 LZTS1Q9Y250 596 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 ATG2AQ2TAZ0 1938 aa18.99■□□□□ 0.63
TRIM47-203ENST00000586495 FSD2A1L4K1 749 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 FAM205CA6NFA0 338 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 BTBD18B2RXH4 712 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 GAS2O43903 313 aaKnown RBP18.98■□□□□ 0.63
TRIM47-203ENST00000586495 PPM1AP35813 382 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 NRIP1P48552 1158 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 PLCB3Q01970 1234 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 DLX2Q07687 328 aaPredicted RBP18.98■□□□□ 0.63
TRIM47-203ENST00000586495 ZNF598Q86UK7 904 aaKnown RBP18.98■□□□□ 0.63
TRIM47-203ENST00000586495 DIS3L2Q8IYB7 885 aaKnown RBP18.98■□□□□ 0.63
TRIM47-203ENST00000586495 MRPS27Q92552 414 aaKnown RBP18.98■□□□□ 0.63
TRIM47-203ENST00000586495 DYDC2Q96IM9 177 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 ZNF558Q96NG5 402 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 TRAIPQ9BWF2 469 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 MRPL9Q9BYD2 267 aaKnown RBP18.98■□□□□ 0.63
TRIM47-203ENST00000586495 DHX33Q9H6R0 707 aaKnown RBP18.98■□□□□ 0.63
TRIM47-203ENST00000586495 TLE6Q9H808 572 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 HCSTQ9UBK5 93 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 CD207Q9UJ71 328 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 PCDHA12Q9UN75 941 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 COL4A3BPQ9Y5P4 624 aa18.98■□□□□ 0.63
TRIM47-203ENST00000586495 LINC01565O15544 149 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 MBTPS2O43462 519 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 JAK2O60674 1132 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 SEC24BO95487 1268 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 YWHABP31946 246 aaKnown RBP18.97■□□□□ 0.63
TRIM47-203ENST00000586495 KRT17Q04695 432 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 SPIRE1Q08AE8 756 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 SMAD4Q13485 552 aaKnown RBP18.97■□□□□ 0.63
TRIM47-203ENST00000586495 CLUL1Q15846 466 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 CALCRLQ16602 461 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 TWF2Q6IBS0 349 aaKnown RBP18.97■□□□□ 0.63
TRIM47-203ENST00000586495 KCNT2Q6UVM3 1135 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 LRRC55Q6ZSA7 311 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 CATSPER4Q7RTX7 472 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 RBM23Q86U06 439 aaKnown RBP18.97■□□□□ 0.63
TRIM47-203ENST00000586495 TCP11Q8WWU5 503 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 PSPC1Q8WXF1 523 aaKnown RBP18.97■□□□□ 0.63
TRIM47-203ENST00000586495 CDCA3Q99618 268 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-203ENST00000586495 RGL1Q9NZL6 768 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 WRAP73Q9P2S5 460 aaPredicted RBP18.97■□□□□ 0.63
TRIM47-203ENST00000586495 LIMCH1Q9UPQ0 1083 aa18.97■□□□□ 0.63
TRIM47-203ENST00000586495 PIN4Q9Y237 131 aaKnown RBP18.97■□□□□ 0.63
TRIM47-203ENST00000586495 PI4K2BG5E9Z4 385 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 ASAP2O43150 1006 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 TBX10O75333 385 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 PHKA2P46019 1235 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 RAB27AP51159 221 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 FOSBP53539 338 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 CYP4A11Q02928 519 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 CTTNQ14247 550 aaKnown RBP18.96■□□□□ 0.63
TRIM47-203ENST00000586495 SAFBQ15424 915 aaKnown RBP eCLIP18.96■□□□□ 0.63
TRIM47-203ENST00000586495 SMAD2Q15796 467 aaKnown RBP18.96■□□□□ 0.63
TRIM47-203ENST00000586495 XKR9Q5GH70 373 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 CLLU1OSQ5K130 101 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 SRGAP1Q7Z6B7 1085 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 KSR1Q8IVT5 923 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 TPH2Q8IWU9 490 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 ADHFE1Q8IWW8 467 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 HELQQ8TDG4 1101 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 SPG21Q9NZD8 308 aa18.96■□□□□ 0.63
TRIM47-203ENST00000586495 PLXNA4Q9HCM2 1894 aa18.95■□□□□ 0.62
TRIM47-203ENST00000586495 CARNS1A5YM72 827 aa18.95■□□□□ 0.62
TRIM47-203ENST00000586495 NEMFO60524 1076 aa18.95■□□□□ 0.62
TRIM47-203ENST00000586495 ATF7P17544 494 aaPredicted RBP18.95■□□□□ 0.62
TRIM47-203ENST00000586495 ERVFC1P60507 584 aa18.95■□□□□ 0.62
TRIM47-203ENST00000586495 TMEM31Q5JXX7 168 aa18.95■□□□□ 0.62
TRIM47-203ENST00000586495 ZNF579Q8NAF0 562 aaKnown RBP18.95■□□□□ 0.62
TRIM47-203ENST00000586495 PRPF31Q8WWY3 499 aaKnown RBP18.95■□□□□ 0.62
TRIM47-203ENST00000586495 KHSRPQ92945 711 aaKnown RBP eCLIP18.95■□□□□ 0.62
TRIM47-203ENST00000586495 TMEM143Q96AN5 459 aa18.95■□□□□ 0.62
TRIM47-203ENST00000586495 POP1Q99575 1024 aaKnown RBP18.95■□□□□ 0.62
TRIM47-203ENST00000586495 EIF2AK1Q9BQI3 630 aaKnown RBP18.95■□□□□ 0.62
TRIM47-203ENST00000586495 TTC12Q9H892 705 aaPredicted RBP18.95■□□□□ 0.62
TRIM47-203ENST00000586495 IFT122Q9HBG6 1241 aa18.95■□□□□ 0.62
TRIM47-203ENST00000586495 NGRNQ9NPE2 291 aaKnown RBP18.95■□□□□ 0.62
TRIM47-203ENST00000586495 BDP1A6H8Y1 2624 aa18.94■□□□□ 0.62
TRIM47-203ENST00000586495 FSCN2O14926 492 aa18.94■□□□□ 0.62
TRIM47-203ENST00000586495 SLITRK3O94933 977 aa18.94■□□□□ 0.62
TRIM47-203ENST00000586495 EYA4O95677 639 aa18.94■□□□□ 0.62
TRIM47-203ENST00000586495 SRGAP2CP0DJJ0 459 aa18.94■□□□□ 0.62
TRIM47-203ENST00000586495 ALADP13716 330 aa18.94■□□□□ 0.62
TRIM47-203ENST00000586495 ZP2Q05996 745 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms