RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 ODR4Q5SWX8 454 aa23.79■■□□□ 1.4
RETREG3-202ENST00000585726 AXDND1Q5T1B0 1012 aaPredicted RBP23.79■■□□□ 1.4
RETREG3-202ENST00000585726 SHC4Q6S5L8 630 aa23.79■■□□□ 1.4
RETREG3-202ENST00000585726 TMCO2Q7Z6W1 182 aaPredicted RBP23.79■■□□□ 1.4
RETREG3-202ENST00000585726 PDILTQ8N807 584 aa23.79■■□□□ 1.4
RETREG3-202ENST00000585726 RAD54LQ92698 747 aa23.79■■□□□ 1.4
RETREG3-202ENST00000585726 TMX1Q9H3N1 280 aa23.79■■□□□ 1.4
RETREG3-202ENST00000585726 GDPD2Q9HCC8 539 aa23.79■■□□□ 1.4
RETREG3-202ENST00000585726 BLOC1S4Q9NUP1 217 aa23.79■■□□□ 1.4
RETREG3-202ENST00000585726 EFCAB14O75071 495 aa23.78■■□□□ 1.4
RETREG3-202ENST00000585726 ATP2A2P16615 1042 aaKnown RBP23.78■■□□□ 1.4
RETREG3-202ENST00000585726 CAPSQ13938 189 aa23.78■■□□□ 1.4
RETREG3-202ENST00000585726 LRIT3Q3SXY7 679 aa23.78■■□□□ 1.4
RETREG3-202ENST00000585726 C1orf186Q6ZWK4 172 aa23.78■■□□□ 1.4
RETREG3-202ENST00000585726 MYOCDQ8IZQ8 938 aa23.78■■□□□ 1.4
RETREG3-202ENST00000585726 INO80BQ9C086 356 aaPredicted RBP23.78■■□□□ 1.4
RETREG3-202ENST00000585726 IFT122Q9HBG6 1241 aa23.78■■□□□ 1.4
RETREG3-202ENST00000585726 CIZ1Q9ULV3 898 aaPredicted RBP23.78■■□□□ 1.4
RETREG3-202ENST00000585726 A0A087X0B3 334 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 NPHP3-ACAD11A0A0J9YXS1 232 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.77■■□□□ 1.4
RETREG3-202ENST00000585726 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.77■■□□□ 1.4
RETREG3-202ENST00000585726 LRRIQ4A6NIV6 560 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 HIP1RO75146 1068 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 AMHP03971 560 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 STAT6P42226 847 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 PHKA2P46019 1235 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 FAM117BQ6P1L5 589 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 CCDC73Q6ZRK6 1079 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 GPBP1Q86WP2 473 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 BSNDQ8WZ55 320 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 LARP4BQ92615 738 aaKnown RBP23.77■■□□□ 1.4
RETREG3-202ENST00000585726 FTHL17Q9BXU8 183 aa23.77■■□□□ 1.4
RETREG3-202ENST00000585726 SCAND2PQ9GZW5 306 aaPredicted RBP23.77■■□□□ 1.4
RETREG3-202ENST00000585726 LOXHD1Q8IVV2 1947 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.76■■□□□ 1.39
RETREG3-202ENST00000585726 SOX1O00570 391 aaPredicted RBP23.76■■□□□ 1.39
RETREG3-202ENST00000585726 ENPP3O14638 875 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 UPP2O95045 317 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 SFPQP23246 707 aaKnown RBP eCLIP23.76■■□□□ 1.39
RETREG3-202ENST00000585726 RABGGTBP53611 331 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 CACNB1Q02641 598 aaPredicted RBP23.76■■□□□ 1.39
RETREG3-202ENST00000585726 CATSPER4Q7RTX7 472 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 KIFAP3Q92845 792 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 SLC9A7Q96T83 725 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 MINDY3Q9H8M7 445 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 FAM13BQ9NYF5 915 aa23.76■■□□□ 1.39
RETREG3-202ENST00000585726 DENND3A2RUS2 1198 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 SFI1A8K8P3 1242 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 INO80B-WBP1J3KQ70 363 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 MGEA5O60502 916 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 KRT18P05783 430 aaKnown RBP23.75■■□□□ 1.39
RETREG3-202ENST00000585726 SRGAP1Q7Z6B7 1085 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 RTN4RL1Q86UN2 441 aaPredicted RBP23.75■■□□□ 1.39
RETREG3-202ENST00000585726 LINC01599Q8WXQ3 324 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 IFT74Q96LB3 600 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 ADAM2Q99965 735 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 CHMP5Q9NZZ3 219 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 STK17AQ9UEE5 414 aa23.75■■□□□ 1.39
RETREG3-202ENST00000585726 ZSCAN20P17040 1043 aaPredicted RBP23.74■■□□□ 1.39
RETREG3-202ENST00000585726 GUCY2CP25092 1073 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 PTENP60484 403 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 NAALADL2Q58DX5 795 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 ARSHQ5FYA8 562 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 HERC6Q8IVU3 1022 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 DEPTORQ8TB45 409 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 PHOSPHO2Q8TCD6 241 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 DHX58Q96C10 678 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 LRCH3Q96II8 777 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 DRC1Q96MC2 740 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 ZBED2Q9BTP6 218 aa23.74■■□□□ 1.39
RETREG3-202ENST00000585726 CCDC169A6NNP5 214 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 LIG1P18858 919 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 PBX2P40425 430 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 PEX3P56589 373 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 RESP18Q5W5W9 173 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 SV2BQ7L1I2 683 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 DAW1Q8N136 415 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 KIFC3Q9BVG8 833 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 TIPINQ9BVW5 301 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 KCND2Q9NZV8 630 aa23.73■■□□□ 1.39
RETREG3-202ENST00000585726 RANBP2P49792 3224 aaKnown RBP23.72■■□□□ 1.39
RETREG3-202ENST00000585726 ERLIN2O94905 339 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 NAMPTP43490 491 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 SMAD3P84022 425 aaKnown RBP23.72■■□□□ 1.39
RETREG3-202ENST00000585726 POU5F1BQ06416 359 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 MAPK7Q13164 816 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 PPP2R5AQ15172 486 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 ADALQ6DHV7 355 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 ZBTB8OSQ8IWT0 167 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 IPO9Q96P70 1041 aaKnown RBP23.72■■□□□ 1.39
RETREG3-202ENST00000585726 PBX4Q9BYU1 374 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 TSPYL2Q9H2G4 693 aaPredicted RBP23.72■■□□□ 1.39
RETREG3-202ENST00000585726 ZHX3Q9H4I2 956 aa23.72■■□□□ 1.39
RETREG3-202ENST00000585726 PIN4Q9Y237 131 aaKnown RBP23.72■■□□□ 1.39
RETREG3-202ENST00000585726 POLR2DO15514 142 aaKnown RBP23.71■■□□□ 1.39
RETREG3-202ENST00000585726 MYOGP15173 224 aa23.71■■□□□ 1.39
RETREG3-202ENST00000585726 MBTD1Q05BQ5 628 aa23.71■■□□□ 1.39
RETREG3-202ENST00000585726 DYMQ7RTS9 669 aa23.71■■□□□ 1.39
RETREG3-202ENST00000585726 STAMQ92783 540 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms