RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 HAUS3Q68CZ6 603 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 POTEGQ6S5H5 508 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 BRAPQ7Z569 592 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 FERMT3Q86UX7 667 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 IFNLR1Q8IU57 520 aaPredicted RBP9.62□□□□□ -0.87
ATG4D-202ENST00000585437 RHPN2Q8IUC4 686 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 KSR1Q8IVT5 923 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 GDPD5Q8WTR4 605 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 TCP11Q8WWU5 503 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 PSPC1Q8WXF1 523 aaKnown RBP9.62□□□□□ -0.87
ATG4D-202ENST00000585437 ARNTL2Q8WYA1 636 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 ZNF668Q96K58 619 aaPredicted RBP9.62□□□□□ -0.87
ATG4D-202ENST00000585437 MTRQ99707 1265 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 FDXACB1Q9BRP7 624 aaPredicted RBP9.62□□□□□ -0.87
ATG4D-202ENST00000585437 RNF19AQ9NV58 838 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 TMEM161AQ9NX61 479 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 LMCD1Q9NZU5 365 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 TRIP11Q15643 1979 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 DENND3A2RUS2 1198 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 H3BNC9 293 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 H3BQV1 296 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 ATF7P17544 494 aaPredicted RBP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 SFPQP23246 707 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 ARL2P36404 184 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 POU5F1BQ06416 359 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 LAMTOR4Q0VGL1 99 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 ECM1Q16610 540 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 LARP1BQ659C4 914 aaKnown RBP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 MCTP1Q6DN14 999 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 ZNF598Q86UK7 904 aaKnown RBP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 TMEM192Q8IY95 271 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 FIBCD1Q8N539 461 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 FBXO22Q8NEZ5 403 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 ERMNQ8TAM6 284 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 PIGOQ8TEQ8 1089 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 PRPF31Q8WWY3 499 aaKnown RBP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 TMEM143Q96AN5 459 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 NLRP4Q96MN2 994 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 MMTAG2Q9BU76 263 aaKnown RBP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 NFKBIZQ9BYH8 718 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 GCOM2Q9BZD3 368 aaPredicted RBP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 INO80BQ9C086 356 aaPredicted RBP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 MINDY3Q9H8M7 445 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 ATP6V0A4Q9HBG4 840 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 AGPAT5Q9NUQ2 364 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 RNF216Q9NWF9 866 aaPredicted RBP9.61□□□□□ -0.87
ATG4D-202ENST00000585437 LRWD1Q9UFC0 647 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 MTUS1Q9ULD2 1270 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 RWDD3Q9Y3V2 267 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 ATP6V1DQ9Y5K8 247 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 CUL9Q8IWT3 2517 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 BRWD1Q9NSI6 2320 aa9.61□□□□□ -0.87
ATG4D-202ENST00000585437 A0A0U1RQF3 1178 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 ASAP2O43150 1006 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 CSDE1O75534 798 aaKnown RBP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 BRD1O95696 1058 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 RB1P06400 928 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 PDCP20941 246 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 SYT1P21579 422 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 FGFR4P22455 802 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 IGFBP4P22692 258 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 GATMP50440 423 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 PTENP60484 403 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 CAPSQ13938 189 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 BTG3Q14201 252 aaPredicted RBP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 MXD4Q14582 209 aaPredicted RBP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 PCBP1Q15365 356 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 HYIQ5T013 277 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 L1TD1Q5T7N2 865 aaKnown RBP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 ARL6IP4Q66PJ3 421 aaKnown RBP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 SRGAP1Q7Z6B7 1085 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 ECHDC2Q86YB7 292 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 P2RX5Q93086 422 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 SCLT1Q96NL6 688 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 NACC1Q96RE7 527 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 RAB34Q9BZG1 259 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 CHST12Q9NRB3 414 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 BMP2KQ9NSY1 1161 aaPredicted RBP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 STK24Q9Y6E0 443 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 MRPL42Q9Y6G3 142 aaKnown RBP9.6□□□□□ -0.87
ATG4D-202ENST00000585437 CITO14578 2027 aa9.6□□□□□ -0.87
ATG4D-202ENST00000585437 PP2D1A8MPX8 630 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
ATG4D-202ENST00000585437 USO1O60763 962 aaKnown RBP9.59□□□□□ -0.87
ATG4D-202ENST00000585437 ZNF623O75123 536 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 ZSCAN20P17040 1043 aaPredicted RBP9.59□□□□□ -0.87
ATG4D-202ENST00000585437 GLRA2P23416 452 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 BMPR1AP36894 532 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 CCT6AP40227 531 aaKnown RBP9.59□□□□□ -0.87
ATG4D-202ENST00000585437 PHKA2P46019 1235 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 RESTQ13127 1097 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 AMHR2Q16671 573 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 CLLU1OSQ5K130 101 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 CDCA2Q69YH5 1023 aaPredicted RBP9.59□□□□□ -0.87
ATG4D-202ENST00000585437 RNF149Q8NC42 400 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 MCPH1Q8NEM0 835 aa9.59□□□□□ -0.87
ATG4D-202ENST00000585437 ASAP3Q8TDY4 903 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms