RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 WNT16Q9UBV4 365 aa16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 MAP1BP46821 2468 aaKnown RBP16.05■□□□□ 0.16
CSNK1D-224ENST00000584672 A0A0U1RQF3 1178 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 LRRN2O75325 713 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 EIF4BP23588 611 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 SMARCA1P28370 1054 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 GNAQP50148 359 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 POLGP54098 1239 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 KLHL5Q96PQ7 755 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 MYADMQ96S97 322 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 MAP3K14Q99558 947 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 FOXQ1Q9C009 403 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 NRDE2Q9H7Z3 1164 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 DNAJB4Q9UDY4 337 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 IRAK3Q9Y616 596 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 CACNA1IQ9P0X4 2223 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 COL4A3Q01955 1670 aa16.04■□□□□ 0.16
CSNK1D-224ENST00000584672 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 MEIS3P2A8K0S8 358 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 MEIS1O00470 390 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 C2CD2LO14523 706 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 B4GALT3O60512 393 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 GALTP07902 379 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 CNPP09543 421 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 SLC11A1P49279 550 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 CLCN4P51793 760 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 NAPAP54920 295 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 GIT2Q14161 759 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 WWC2Q6AWC2 1192 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 TYW1BQ6NUM6 668 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 PPFIBP1Q86W92 1011 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 PLA2G4DQ86XP0 818 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 C1orf210Q8IVY1 113 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 SLC44A3Q8N4M1 653 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 BBXQ8WY36 941 aaPredicted RBP16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 MAN1C1Q9NR34 630 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 TBC1D13Q9NVG8 400 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 DLGAP2Q9P1A6 1054 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 NCDNQ9UBB6 729 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 SIT1Q9Y3P8 196 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 DOCK8Q8NF50 2099 aa16.03■□□□□ 0.16
CSNK1D-224ENST00000584672 WDR81Q562E7 1941 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 MIA3Q5JRA6 1907 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 PRC1O43663 620 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 KINO60870 393 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 SRFP11831 508 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 GPC3P51654 580 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 RNASELQ05823 741 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 COL9A3Q14050 684 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 CASC1Q6TDU7 716 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 SMC5Q8IY18 1101 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 SUMF1Q8NBK3 374 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 NLRP7Q8WX94 980 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 EMILIN2Q9BXX0 1053 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 ARHGEF3Q9NR81 526 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 GABBR1Q9UBS5 961 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 TCEAL9Q9UHQ7 104 aa16.02■□□□□ 0.16
CSNK1D-224ENST00000584672 CLUHO75153 1309 aa16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 FAM86B1E9PN63 330 aa16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 DHX15O43143 795 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 RFPL2O75678 378 aa16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 FAM86B2P0C5J1 330 aa16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 GLULP15104 373 aa16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 NONOQ15233 471 aaKnown RBP eCLIP16.01■□□□□ 0.159e-7■■■■□ 23.1
CSNK1D-224ENST00000584672 NOMO2Q5JPE7 1267 aa16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 LINC01465Q8N7H1 131 aa16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 ZFHX4Q86UP3 3567 aa16.01■□□□□ 0.15
CSNK1D-224ENST00000584672 CHD8Q9HCK8 2581 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 CCDC195A0A1B0GUA6 201 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 DCDC2BA2VCK2 349 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 IPO5O00410 1097 aaKnown RBP16■□□□□ 0.15
CSNK1D-224ENST00000584672 SH2B2O14492 632 aaPredicted RBP16■□□□□ 0.15
CSNK1D-224ENST00000584672 MAGEB2O15479 319 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 TMOD1P28289 359 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 SREBF1P36956 1147 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 PHKA2P46019 1235 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 ADCY7P51828 1080 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 ATXN1P54253 815 aaKnown RBP16■□□□□ 0.15
CSNK1D-224ENST00000584672 NUCB1Q02818 461 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 ST3GAL2Q16842 350 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
CSNK1D-224ENST00000584672 TWF2Q6IBS0 349 aaKnown RBP16■□□□□ 0.15
CSNK1D-224ENST00000584672 DCLRE1AQ6PJP8 1040 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 GLB1LQ6UWU2 654 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 C15orf39Q6ZRI6 1047 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 TMTC3Q6ZXV5 915 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 ZNF280BQ86YH2 543 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 ZNF577Q9BSK1 485 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 LRRC2Q9BYS8 371 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 RIC8AQ9NPQ8 531 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 DACT1Q9NYF0 836 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
CSNK1D-224ENST00000584672 MAFBQ9Y5Q3 323 aaPredicted RBP16■□□□□ 0.15
CSNK1D-224ENST00000584672 INPPL1O15357 1258 aa15.99■□□□□ 0.15
CSNK1D-224ENST00000584672 PSAPP07602 524 aa15.99■□□□□ 0.15
CSNK1D-224ENST00000584672 SPATA31D3P0C874 917 aa15.99■□□□□ 0.15
CSNK1D-224ENST00000584672 AK2P54819 239 aa15.99■□□□□ 0.15
CSNK1D-224ENST00000584672 DRP2Q13474 957 aa15.99■□□□□ 0.15
CSNK1D-224ENST00000584672 VARS2Q5ST30 1063 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms