RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 PHKA2P46019 1235 aa30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 PCBP1Q15365 356 aaKnown RBP eCLIP30.22■■■□□ 2.432e-6■■■■□ 20
SMARCD2-210ENST00000584400 ARL6IP4Q66PJ3 421 aaKnown RBP30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 POTEGQ6S5H5 508 aa30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 CATSPER4Q7RTX7 472 aa30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 SPRED2Q7Z698 418 aa30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 RNF149Q8NC42 400 aa30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 SNX29Q8TEQ0 813 aa30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 IFT122Q9HBG6 1241 aa30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 XPNPEP1Q9NQW7 623 aa30.22■■■□□ 2.43
SMARCD2-210ENST00000584400 ARHGEF35A5YM69 484 aa30.21■■■□□ 2.43
SMARCD2-210ENST00000584400 FGFR4P22455 802 aa30.21■■■□□ 2.43
SMARCD2-210ENST00000584400 POU5F1BQ06416 359 aa30.21■■■□□ 2.43
SMARCD2-210ENST00000584400 MTCH2Q9Y6C9 303 aa30.21■■■□□ 2.43
SMARCD2-210ENST00000584400 USO1O60763 962 aaKnown RBP30.2■■■□□ 2.43
SMARCD2-210ENST00000584400 CSDE1O75534 798 aaKnown RBP30.2■■■□□ 2.43
SMARCD2-210ENST00000584400 SKIP12755 728 aa30.2■■■□□ 2.43
SMARCD2-210ENST00000584400 PPM1EQ8WY54 764 aa30.2■■■□□ 2.43
SMARCD2-210ENST00000584400 CLP1Q92989 425 aaKnown RBP30.2■■■□□ 2.43
SMARCD2-210ENST00000584400 A0A0U1RQF3 1178 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 SYT1P21579 422 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 ARL2P36404 184 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 BMPR1AP36894 532 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 NCBP1Q09161 790 aaKnown RBP30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 PTPROQ16827 1216 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 GDPD5Q8WTR4 605 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 TRAIPQ9BWF2 469 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 PLVAPQ9BX97 442 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 KIAA1024Q9UPX6 916 aa30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 PIN4Q9Y237 131 aaKnown RBP30.19■■■□□ 2.42
SMARCD2-210ENST00000584400 TTC3P53804 2025 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 A0A087WWV3 80 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 C5orf67F2Z3F1 127 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 H3BNC9 293 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 LPXNO60711 386 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 EOMESO95936 686 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 CTNNB1P35222 781 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 TWF2Q6IBS0 349 aaKnown RBP30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 ECHDC2Q86YB7 292 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 ABI1Q8IZP0 508 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 MICALL1Q8N3F8 863 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 KCTD17Q8N5Z5 321 aa30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 C11orf84Q9BUA3 381 aaPredicted RBP30.18■■■□□ 2.42
SMARCD2-210ENST00000584400 HSP90AA1P07900 732 aaKnown RBP30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 RAB27AP51159 221 aa30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 GPM6BQ13491 265 aa30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 CCDC85BQ15834 202 aaPredicted RBP30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 PAN2Q504Q3 1202 aaKnown RBP30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 PADI6Q6TGC4 694 aa30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 RSPH1Q8WYR4 309 aa30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 NFKBIZQ9BYH8 718 aa30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 POLR3FQ9H1D9 316 aaPredicted RBP30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 AGPAT5Q9NUQ2 364 aa30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 DDX19AQ9NUU7 478 aaKnown RBP30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 DNM3Q9UQ16 869 aa30.17■■■□□ 2.42
SMARCD2-210ENST00000584400 TBKBP1A7MCY6 615 aa30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 ERLIN2O94905 339 aa30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 PDIA4P13667 645 aaKnown RBP30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 PTENP60484 403 aa30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 IL17AQ16552 155 aa30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 IFNLR1Q8IU57 520 aaPredicted RBP30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 PHF6Q8IWS0 365 aaKnown RBP eCLIP30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 AK8Q96MA6 479 aa30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 TMEM117Q9H0C3 514 aa30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 AAASQ9NRG9 546 aa30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 FOXD4L1Q9NU39 408 aa30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 MRPL42Q9Y6G3 142 aaKnown RBP30.16■■■□□ 2.42
SMARCD2-210ENST00000584400 CDH23Q9H251 3354 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 VWA3AA6NCI4 1184 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 CYP11B2P19099 503 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 NAALADL2Q58DX5 795 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 FAM102BQ5T8I3 360 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 MAEAQ7L5Y9 396 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 NT5C3AQ9H0P0 336 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 BHMT2Q9H2M3 363 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 LOXHD1Q8IVV2 1947 aa30.15■■■□□ 2.42
SMARCD2-210ENST00000584400 GLRA2P23416 452 aa30.14■■■□□ 2.42
SMARCD2-210ENST00000584400 AXLP30530 894 aa30.14■■■□□ 2.42
SMARCD2-210ENST00000584400 RNF169Q8NCN4 708 aa30.14■■■□□ 2.42
SMARCD2-210ENST00000584400 ASAP3Q8TDY4 903 aa30.14■■■□□ 2.42
SMARCD2-210ENST00000584400 INO80B-WBP1J3KQ70 363 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 FGFR1P11362 822 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 CAPSQ13938 189 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 ECM1Q16610 540 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 SPOUT1Q5T280 376 aaKnown RBP30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 P2RX5Q93086 422 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 MRPL38Q96DV4 380 aaKnown RBP30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 CDK5RAP3Q96JB5 506 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 LMAN2LQ9H0V9 348 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 ZSCAN16Q9H4T2 348 aaPredicted RBP30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 FAM105AQ9NUU6 356 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 CHD9Q3L8U1 2897 aa30.13■■■□□ 2.41
SMARCD2-210ENST00000584400 PP2D1A8MPX8 630 aa30.12■■■□□ 2.41
SMARCD2-210ENST00000584400 SLC26A4O43511 780 aa30.12■■■□□ 2.41
SMARCD2-210ENST00000584400 STX6O43752 255 aa30.12■■■□□ 2.41
SMARCD2-210ENST00000584400 EYA4O95677 639 aa30.12■■■□□ 2.41
SMARCD2-210ENST00000584400 LINC00271P0C7V0 271 aa30.12■■■□□ 2.41
SMARCD2-210ENST00000584400 GATMP50440 423 aa30.12■■■□□ 2.41
SMARCD2-210ENST00000584400 PPP2R5AQ15172 486 aa30.12■■■□□ 2.41
SMARCD2-210ENST00000584400 SF3A1Q15459 793 aaKnown RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms