RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 GLB1LQ6UWU2 654 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 LRRC71Q8N4P6 559 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 LINC01465Q8N7H1 131 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 C12orf76Q8N812 135 aaPredicted RBP15.09■□□□□ 0.01
COPS3-218ENST00000584216 EMILIN2Q9BXX0 1053 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 GCOM2Q9BZD3 368 aaPredicted RBP15.09■□□□□ 0.01
COPS3-218ENST00000584216 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
COPS3-218ENST00000584216 SEMA4AQ9H3S1 761 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 SMOC2Q9H3U7 446 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 PLXNA3P51805 1871 aa15.09■□□□□ 0.01
COPS3-218ENST00000584216 LOXHD1Q8IVV2 1947 aa15.08■□□□□ 0
COPS3-218ENST00000584216 ESYT2A0FGR8 921 aa15.08■□□□□ 0
COPS3-218ENST00000584216 NT5C1B-RDH14C9J2C7 533 aa15.08■□□□□ 0
COPS3-218ENST00000584216 SFPQP23246 707 aaKnown RBP eCLIP15.08■□□□□ 0
COPS3-218ENST00000584216 RCAN1P53805 252 aa15.08■□□□□ 0
COPS3-218ENST00000584216 RNASELQ05823 741 aaKnown RBP15.08■□□□□ 0
COPS3-218ENST00000584216 TBC1D8BQ0IIM8 1120 aa15.08■□□□□ 0
COPS3-218ENST00000584216 FUT2Q10981 343 aa15.08■□□□□ 0
COPS3-218ENST00000584216 ELMSAN1Q6PJG2 1045 aa15.08■□□□□ 0
COPS3-218ENST00000584216 CCDC105Q8IYK2 499 aa15.08■□□□□ 0
COPS3-218ENST00000584216 REXO1Q8N1G1 1221 aaKnown RBP15.08■□□□□ 0
COPS3-218ENST00000584216 CRYGNQ8WXF5 182 aa15.08■□□□□ 0
COPS3-218ENST00000584216 IGSF21Q96ID5 467 aa15.08■□□□□ 0
COPS3-218ENST00000584216 TRAIPQ9BWF2 469 aa15.08■□□□□ 0
COPS3-218ENST00000584216 INO80BQ9C086 356 aaPredicted RBP15.08■□□□□ 0
COPS3-218ENST00000584216 C6orf50Q9HD87 102 aa15.08■□□□□ 0
COPS3-218ENST00000584216 DUSP12Q9UNI6 340 aa15.08■□□□□ 0
COPS3-218ENST00000584216 CCDC196A0A1B0GTZ2 297 aa15.07■□□□□ 0
COPS3-218ENST00000584216 GOLGA8AA7E2F4 631 aa15.07■□□□□ 0
COPS3-218ENST00000584216 GOLGA8BA8MQT2 603 aa15.07■□□□□ 0
COPS3-218ENST00000584216 EPCAMP16422 314 aa15.07■□□□□ 0
COPS3-218ENST00000584216 GNA11P29992 359 aa15.07■□□□□ 0
COPS3-218ENST00000584216 SFNP31947 248 aa15.07■□□□□ 0
COPS3-218ENST00000584216 PHKA2P46019 1235 aa15.07■□□□□ 0
COPS3-218ENST00000584216 DNM2P50570 870 aa15.07■□□□□ 0
COPS3-218ENST00000584216 RAB27AP51159 221 aa15.07■□□□□ 0
COPS3-218ENST00000584216 PRKCEQ02156 737 aa15.07■□□□□ 0
COPS3-218ENST00000584216 NECTIN1Q15223 517 aa15.07■□□□□ 0
COPS3-218ENST00000584216 NONOQ15233 471 aaKnown RBP eCLIP15.07■□□□□ 0
COPS3-218ENST00000584216 ANGPT1Q15389 498 aa15.07■□□□□ 0
COPS3-218ENST00000584216 PRR16Q569H4 304 aa15.07■□□□□ 0
COPS3-218ENST00000584216 CWF19L1Q69YN2 538 aaKnown RBP15.07■□□□□ 0
COPS3-218ENST00000584216 TWF2Q6IBS0 349 aaKnown RBP15.07■□□□□ 0
COPS3-218ENST00000584216 TMC5Q6UXY8 1006 aa15.07■□□□□ 0
COPS3-218ENST00000584216 C15orf39Q6ZRI6 1047 aa15.07■□□□□ 0
COPS3-218ENST00000584216 GPR149Q86SP6 731 aa15.07■□□□□ 0
COPS3-218ENST00000584216 SLC22A17Q8WUG5 538 aa15.07■□□□□ 0
COPS3-218ENST00000584216 IGSF9Q9P2J2 1179 aa15.07■□□□□ 0
COPS3-218ENST00000584216 DPP7Q9UHL4 492 aa15.07■□□□□ 0
COPS3-218ENST00000584216 RFX1P22670 979 aa15.06■□□□□ 0
COPS3-218ENST00000584216 JAK3P52333 1124 aa15.06■□□□□ 0
COPS3-218ENST00000584216 PFKFB3Q16875 520 aaPredicted RBP15.06■□□□□ 0
COPS3-218ENST00000584216 NOMO2Q5JPE7 1267 aa15.06■□□□□ 0
COPS3-218ENST00000584216 DTWD2Q8NBA8 298 aa15.06■□□□□ 0
COPS3-218ENST00000584216 BICD2Q8TD16 824 aa15.06■□□□□ 0
COPS3-218ENST00000584216 AUTS2Q8WXX7 1259 aa15.06■□□□□ 0
COPS3-218ENST00000584216 ZMYND12Q9H0C1 365 aa15.06■□□□□ 0
COPS3-218ENST00000584216 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
COPS3-218ENST00000584216 DISC1Q9NRI5 854 aa15.06■□□□□ 0
COPS3-218ENST00000584216 GALTP07902 379 aa15.05■□□□□ -0
COPS3-218ENST00000584216 KLRC2P26717 231 aa15.05■□□□□ -0
COPS3-218ENST00000584216 CIITAP33076 1130 aa15.05■□□□□ -0
COPS3-218ENST00000584216 PTPN14Q15678 1187 aa15.05■□□□□ -0
COPS3-218ENST00000584216 CYP26C1Q6V0L0 522 aa15.05■□□□□ -0
COPS3-218ENST00000584216 ZNF410Q86VK4 478 aa15.05■□□□□ -0
COPS3-218ENST00000584216 SIX5Q8N196 739 aa15.05■□□□□ -0
COPS3-218ENST00000584216 URGCPQ8TCY9 931 aa15.05■□□□□ -0
COPS3-218ENST00000584216 KCNG4Q8TDN1 519 aa15.05■□□□□ -0
COPS3-218ENST00000584216 STAMQ92783 540 aa15.05■□□□□ -0
COPS3-218ENST00000584216 PGBD4Q96DM1 585 aa15.05■□□□□ -0
COPS3-218ENST00000584216 ZNF668Q96K58 619 aaPredicted RBP15.05■□□□□ -0
COPS3-218ENST00000584216 RIT2Q99578 217 aa15.05■□□□□ -0
COPS3-218ENST00000584216 ESYT1Q9BSJ8 1104 aa15.05■□□□□ -0
COPS3-218ENST00000584216 KCNK12Q9HB15 430 aa15.05■□□□□ -0
COPS3-218ENST00000584216 TBC1D13Q9NVG8 400 aa15.05■□□□□ -0
COPS3-218ENST00000584216 PIN4Q9Y237 131 aaKnown RBP15.05■□□□□ -0
COPS3-218ENST00000584216 PTPRZ1P23471 2315 aaPredicted RBP15.04■□□□□ -0
COPS3-218ENST00000584216 STK25O00506 426 aa15.04■□□□□ -0
COPS3-218ENST00000584216 ZNF862O60290 1169 aa15.04■□□□□ -0
COPS3-218ENST00000584216 GAS7O60861 476 aa15.04■□□□□ -0
COPS3-218ENST00000584216 LMNAP02545 664 aaKnown RBP15.04■□□□□ -0
COPS3-218ENST00000584216 FGFR4P22455 802 aa15.04■□□□□ -0
COPS3-218ENST00000584216 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
COPS3-218ENST00000584216 LETM2Q2VYF4 491 aa15.04■□□□□ -0
COPS3-218ENST00000584216 DHX32Q7L7V1 743 aaKnown RBP15.04■□□□□ -0
COPS3-218ENST00000584216 TMEM173Q86WV6 379 aaPredicted RBP15.04■□□□□ -0
COPS3-218ENST00000584216 RDM1Q8NG50 284 aa15.04■□□□□ -0
COPS3-218ENST00000584216 JPH2Q9BR39 696 aaPredicted RBP15.04■□□□□ -0
COPS3-218ENST00000584216 NRDE2Q9H7Z3 1164 aa15.04■□□□□ -0
COPS3-218ENST00000584216 MRPL17Q9NRX2 175 aaKnown RBP15.04■□□□□ -0
COPS3-218ENST00000584216 FAM105AQ9NUU6 356 aa15.04■□□□□ -0
COPS3-218ENST00000584216 WNT16Q9UBV4 365 aa15.04■□□□□ -0
COPS3-218ENST00000584216 SSX2IPQ9Y2D8 614 aa15.04■□□□□ -0
COPS3-218ENST00000584216 INPP5FQ9Y2H2 1132 aa15.04■□□□□ -0
COPS3-218ENST00000584216 KLF18A0A0U1RQI7 1052 aa15.03■□□□□ -0
COPS3-218ENST00000584216 ZNF623O75123 536 aa15.03■□□□□ -0
COPS3-218ENST00000584216 HMGB1P09429 215 aaKnown RBP15.03■□□□□ -0
COPS3-218ENST00000584216 NPR3P17342 541 aa15.03■□□□□ -0
COPS3-218ENST00000584216 CLCN4P51793 760 aa15.03■□□□□ -0
COPS3-218ENST00000584216 FGD1P98174 961 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms