RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 GJB4Q9NTQ9 266 aa17.61■□□□□ 0.41
SKA2-209ENST00000583976 USP34Q70CQ2 3546 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 TMEM221A6NGB7 291 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 M0R296 226 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 MAGEB2O15479 319 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 DARSP14868 501 aaKnown RBP17.6■□□□□ 0.41
SKA2-209ENST00000583976 TECP42680 631 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 MRE11P49959 708 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 MTERF2Q49AM1 385 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 MCTP2Q6DN12 878 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 SYCE2Q6PIF2 218 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 ABI1Q8IZP0 508 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 PRSS33Q8NF86 280 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 BICD2Q8TD16 824 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 HELQQ8TDG4 1101 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 TBCKQ8TEA7 893 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 ZNF558Q96NG5 402 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 PHOX2BQ99453 314 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 TEKT3Q9BXF9 490 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 SH3GLB2Q9NR46 395 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 KCNJ14Q9UNX9 436 aa17.6■□□□□ 0.41
SKA2-209ENST00000583976 PLCB3Q01970 1234 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 TBC1D8BQ0IIM8 1120 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 TARBP2Q15633 366 aaKnown RBP17.59■□□□□ 0.41
SKA2-209ENST00000583976 NPY5RQ15761 445 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 IER5LQ5T953 404 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 ANKRD54Q6NXT1 300 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 TRIM67Q6ZTA4 783 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 ZNF598Q86UK7 904 aaKnown RBP17.59■□□□□ 0.41
SKA2-209ENST00000583976 TMEM173Q86WV6 379 aaPredicted RBP17.59■□□□□ 0.41
SKA2-209ENST00000583976 NLRP7Q8WX94 980 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 WASF1Q92558 559 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 CEP89Q96ST8 783 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 CDCA3Q99618 268 aaPredicted RBP17.59■□□□□ 0.41
SKA2-209ENST00000583976 LLPHQ9BRT6 129 aaKnown RBP17.59■□□□□ 0.41
SKA2-209ENST00000583976 LZTS1Q9Y250 596 aa17.59■□□□□ 0.41
SKA2-209ENST00000583976 NT5C1B-RDH14C9J2C7 533 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 HOXA2O43364 376 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 PSMD10O75832 226 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 STBD1O95210 358 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 ZSCAN20P17040 1043 aaPredicted RBP17.58■□□□□ 0.4
SKA2-209ENST00000583976 XBP1P17861 261 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 TMOD1P28289 359 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 JAK3P52333 1124 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 ZXDAP98168 799 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 LONRF3Q496Y0 759 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 SLC39A11Q8N1S5 342 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 RIT2Q99578 217 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 S1PR5Q9H228 398 aa17.58■□□□□ 0.4
SKA2-209ENST00000583976 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
SKA2-209ENST00000583976 ARID2Q68CP9 1835 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 MEIS3P2A8K0S8 358 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 SFNP31947 248 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 PPM1AP35813 382 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 PLA2G4FQ68DD2 849 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 B3GNT9Q6UX72 402 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 MIER3Q7Z3K6 550 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 ETNPPLQ8TBG4 499 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 FEZF2Q8TBJ5 459 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 BCL7CQ8WUZ0 217 aaPredicted RBP17.57■□□□□ 0.4
SKA2-209ENST00000583976 LPPQ93052 612 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 MFSD14AQ96MC6 490 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 PCDHA4Q9UN74 947 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 HCFC2Q9Y5Z7 792 aa17.57■□□□□ 0.4
SKA2-209ENST00000583976 MYO15AQ9UKN7 3530 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 A0A087WZ62 844 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 A0A0U1RQF3 1178 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 M0R2N6 131 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 SLC37A4O43826 429 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 B4GALT3O60512 393 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 CA8P35219 290 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 VCPP55072 806 aaKnown RBP17.56■□□□□ 0.4
SKA2-209ENST00000583976 HMGN5P82970 282 aaKnown RBP17.56■□□□□ 0.4
SKA2-209ENST00000583976 PDE12Q6L8Q7 609 aaKnown RBP17.56■□□□□ 0.4
SKA2-209ENST00000583976 TMEM184AQ6ZMB5 413 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 KSR1Q8IVT5 923 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 AUTS2Q8WXX7 1259 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 PBXIP1Q96AQ6 731 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
SKA2-209ENST00000583976 PHF20Q9BVI0 1012 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 TSHZ2Q9NRE2 1034 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 NRBP2Q9NSY0 501 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 SPG21Q9NZD8 308 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 DENND4AQ7Z401 1863 aa17.56■□□□□ 0.4
SKA2-209ENST00000583976 K7ELQ4 463 aaPredicted RBP17.55■□□□□ 0.4
SKA2-209ENST00000583976 ZC3H11AO75152 810 aaKnown RBP eCLIP17.55■□□□□ 0.4
SKA2-209ENST00000583976 WEE2P0C1S8 567 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 SRGAP2BP0DMP2 458 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 USP11P51784 963 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 GUCY1B3Q02153 619 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 TRIM29Q14134 588 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 Q4G0T1 1027 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 FAM43BQ6ZT52 329 aaPredicted RBP17.55■□□□□ 0.4
SKA2-209ENST00000583976 BLIDQ8IZY5 108 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 ASIC4Q96FT7 647 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 NLRP4Q96MN2 994 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 SMOC2Q9H3U7 446 aa17.55■□□□□ 0.4
SKA2-209ENST00000583976 POMKQ9H5K3 350 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms