RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 CRHR2Q13324 411 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 PKDCCQ504Y2 493 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 RILPL1Q5EBL4 403 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 EFHC2Q5JST6 749 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 CPLX2Q6PUV4 134 aaKnown RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 SLFN12Q8IYM2 578 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 CELF2-AS1Q8N7Q2 184 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 MICAL1Q8TDZ2 1067 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 ZKSCAN4Q969J2 545 aaPredicted RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 FERMT2Q96AC1 680 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 P2RX7Q99572 595 aaKnown RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 CCSER1Q9C0I3 900 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 CRISPLD1Q9H336 500 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 PRO3102Q9H379 93 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 SUV39H2Q9H5I1 410 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 VEZTQ9HBM0 779 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 C6orf50Q9HD87 102 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 TUFT1Q9NNX1 390 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 SAP30BPQ9UHR5 308 aaKnown RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 GPN3Q9UHW5 284 aaPredicted RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 RCOR1Q9UKL0 485 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 HPSEQ9Y251 543 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 KLF18A0A0U1RQI7 1052 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 FAM221BA6H8Z2 402 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 GOLGA8AA7E2F4 631 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 GOLGA8BA8MQT2 603 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 MAPK13O15264 365 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 PMM2O15305 246 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 EFSO43281 561 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 FIBPO43427 364 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 DUSP11O75319 330 aaKnown RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 PIGRP01833 764 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 XBP1P17861 261 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 CCND2P30279 289 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 STAT3P40763 770 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 SLC1A4P43007 532 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 CCINQ13939 588 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 PGM5Q15124 567 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 TARBP2Q15633 366 aaKnown RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 FAM187BQ17R55 369 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 SEZ6Q53EL9 994 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 FAM83BQ5T0W9 1011 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 SLC17A8Q8NDX2 589 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 OR13H1Q8NG92 308 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 POP1Q99575 1024 aaKnown RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 RHOBTB2Q9BYZ6 727 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 BCL11AQ9H165 835 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 NUCKS1Q9H1E3 243 aaKnown RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 ABHD16BQ9H3Z7 469 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 SENP2Q9HC62 589 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 TXNRD2Q9NNW7 524 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 TBC1D22BQ9NU19 505 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 FAM13BQ9NYF5 915 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 CLIP2Q9UDT6 1046 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 KCNG1Q9UIX4 513 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 MTMR6Q9Y217 621 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 DYRK1BQ9Y463 629 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 OBSL1O75147 1896 aa3.43□□□□□ -1.86
CCDC178-213ENST00000583930 NUP210Q8TEM1 1887 aaPredicted RBP3.43□□□□□ -1.86
CCDC178-213ENST00000583930 UBE2Q2LH0YL09 131 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SMIM22K7EJ46 135 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 DNM1LO00429 736 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 C2CD2LO14523 706 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 GFRA3O60609 400 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SSBP05455 408 aaKnown RBP eCLIP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 POU2F2P09086 479 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SNRPBP14678 240 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TFE3P19532 575 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 BMP8BP34820 402 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 LONP1P36776 959 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 GJA8P48165 433 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ADCY7P51828 1080 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 JAK3P52333 1124 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ZNF131P52739 623 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 RBM5P52756 815 aaKnown RBP eCLIP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 NUCB2P80303 420 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SP3Q02447 781 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SPP2Q13103 211 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 PICALMQ13492 652 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 COL9A3Q14050 684 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 MYBPC2Q14324 1141 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 HSP90AA2PQ14568 343 aaPredicted RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 DUSP28Q4G0W2 176 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 NFRKBQ6P4R8 1299 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 SYNE3Q6ZMZ3 975 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 RUFY4Q6ZNE9 571 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TRIM22Q8IYM9 498 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 CEP120Q8N960 986 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 NSUN6Q8TEA1 469 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 NUDT8Q8WV74 236 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TRIM47Q96LD4 638 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 MXRA8Q9BRK3 442 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 PDCD2LQ9BRP1 358 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 C17orf75Q9HAS0 396 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ATP13A2Q9NQ11 1180 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 A1CFQ9NQ94 594 aaKnown RBP3.42□□□□□ -1.86
CCDC178-213ENST00000583930 AAASQ9NRG9 546 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 ATP8B3O60423 1300 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 TMEM265A0A087WTH1 108 aa3.42□□□□□ -1.86
CCDC178-213ENST00000583930 PTPDC1A2A3K4 754 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms