RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 ACSL6Q9UKU0 697 aa5.97□□□□□ -1.45
SS18-223ENST00000583595 GTF2A1LQ9UNN4 478 aa5.97□□□□□ -1.45
SS18-223ENST00000583595 A0A1W2PQ27 194 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 A0A1W2PQ64 194 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 A0A1W2PQC6 194 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 A0A1W2PQD8 194 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 MAN2B1O00754 1011 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 FGF10O15520 208 aaPredicted RBP5.96□□□□□ -1.46
SS18-223ENST00000583595 MYO1BO43795 1136 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 PPP1R11O60927 126 aaPredicted RBP5.96□□□□□ -1.46
SS18-223ENST00000583595 UBXN7O94888 489 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 GNAT1P11488 350 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 TMEM132BQ14DG7 1078 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 UAP1L1Q3KQV9 507 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 CCDC174Q6PII3 467 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 USP45Q70EL2 814 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 COL23A1Q86Y22 540 aaPredicted RBP5.96□□□□□ -1.46
SS18-223ENST00000583595 NOSTRINQ8IVI9 506 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 SLC41A1Q8IVJ1 513 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 CLASRPQ8N2M8 674 aaKnown RBP5.96□□□□□ -1.46
SS18-223ENST00000583595 PRR18Q8N4B5 295 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 NKAPQ8N5F7 415 aaKnown RBP5.96□□□□□ -1.46
SS18-223ENST00000583595 PANK1Q8TE04 598 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 COA7Q96BR5 231 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 PGBD4Q96DM1 585 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 C1GALT1C1Q96EU7 318 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 MVB12AQ96EY5 273 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 ZHX3Q9H4I2 956 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 ZNF277Q9NRM2 450 aaPredicted RBP5.96□□□□□ -1.46
SS18-223ENST00000583595 RTEL1Q9NZ71 1219 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 SWAP70Q9UH65 585 aa5.96□□□□□ -1.46
SS18-223ENST00000583595 CNOT6Q9ULM6 557 aaKnown RBP5.96□□□□□ -1.46
SS18-223ENST00000583595 ABLIM1O14639 778 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 ALDH2P05091 517 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 SRGNP10124 158 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 ENPP1P22413 925 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 CD40P25942 277 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 TM4SF4P48230 202 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 RPL11P62913 178 aaKnown RBP5.95□□□□□ -1.46
SS18-223ENST00000583595 BIRC3Q13489 604 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 SIM2Q14190 667 aaPredicted RBP5.95□□□□□ -1.46
SS18-223ENST00000583595 RAB3GAP1Q15042 981 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 RNF220Q5VTB9 566 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 OLFML2BQ68BL8 750 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 DARS2Q6PI48 645 aaKnown RBP5.95□□□□□ -1.46
SS18-223ENST00000583595 NPNTQ6UXI9 565 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 KCNK18Q7Z418 384 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 NLRP10Q86W26 655 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 KIAA0319LQ8IZA0 1049 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 TEX19Q8NA77 164 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 DLG3Q92796 817 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 ACAP3Q96P50 834 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 LRFN3Q9BTN0 628 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 CRB3Q9BUF7 120 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 TMEM60Q9H2L4 133 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 CNTD2Q9H8S5 307 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 TNFRSF12AQ9NP84 129 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 ACSS2Q9NR19 701 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 KLHL14Q9P2G3 628 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 KCNG1Q9UIX4 513 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 L1RE1Q9UN81 338 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 KCTD3Q9Y597 815 aa5.95□□□□□ -1.46
SS18-223ENST00000583595 TRBV23OR9-2A0A075B6M9 112 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 NUDT19A8MXV4 375 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 B3GALT2O43825 422 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 HIP1RO75146 1068 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 LPLP06858 475 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 MSL3P1P0C860 447 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 FPR2P25090 351 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 PIK3CBP42338 1070 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 EPHB3P54753 998 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 MVKQ03426 396 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 SSPNQ14714 243 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 FSCN1Q16658 493 aaKnown RBP5.94□□□□□ -1.46
SS18-223ENST00000583595 UGT8Q16880 541 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 LVRNQ6Q4G3 990 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 CYP2R1Q6VVX0 501 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 EP400NLQ6ZTU2 488 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 OTOP3Q7RTS5 596 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 PCGF5Q86SE9 256 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 MYLK4Q86YV6 388 aaPredicted RBP5.94□□□□□ -1.46
SS18-223ENST00000583595 RBM12BQ8IXT5 1001 aaKnown RBP5.94□□□□□ -1.46
SS18-223ENST00000583595 RIN2Q8WYP3 895 aaPredicted RBP5.94□□□□□ -1.46
SS18-223ENST00000583595 RIPOR3Q96MK2 946 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 NEUROD6Q96NK8 337 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 SELENOOQ9BVL4 669 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 B3GNT5Q9BYG0 378 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 CD244Q9BZW8 370 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 PRDM12Q9H4Q4 367 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 B3GALT1Q9Y5Z6 326 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 DGKBQ9Y6T7 804 aa5.94□□□□□ -1.46
SS18-223ENST00000583595 H3BML4 177 aa5.93□□□□□ -1.46
SS18-223ENST00000583595 H7BY64 318 aa5.93□□□□□ -1.46
SS18-223ENST00000583595 N4BP3O15049 544 aa5.93□□□□□ -1.46
SS18-223ENST00000583595 TBC1D8O95759 1140 aa5.93□□□□□ -1.46
SS18-223ENST00000583595 CYP17A1P05093 508 aa5.93□□□□□ -1.46
SS18-223ENST00000583595 CHKAP35790 457 aa5.93□□□□□ -1.46
SS18-223ENST00000583595 PRIM2P49643 509 aa5.93□□□□□ -1.46
SS18-223ENST00000583595 FAM193AP78312 1265 aa5.93□□□□□ -1.46
SS18-223ENST00000583595 SPIRE1Q08AE8 756 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms