RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 SLC22A17Q8WUG5 538 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 TMEM169Q96HH4 297 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 PPP1R16BQ96T49 567 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 OSMRQ99650 979 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 MXRA8Q9BRK3 442 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 SPZ1Q9BXG8 430 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 KCNK12Q9HB15 430 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 KCNH7Q9NS40 1196 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 IGSF9Q9P2J2 1179 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 WNT16Q9UBV4 365 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 PCDHA6Q9UN73 950 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 PCDHA8Q9Y5H6 950 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 NFASCO94856 1347 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-205ENST00000582331 NT5C1B-RDH14C9J2C7 533 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 BACH1O14867 736 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 MAP3K7O43318 606 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 GPR32O75388 356 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 COL1A2P08123 1366 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 KIF5BP33176 963 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 POLGP54098 1239 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-205ENST00000582331 BCAR1P56945 870 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 TBC1D8BQ0IIM8 1120 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 UBE2SQ16763 222 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 RSPO4Q2I0M5 234 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-205ENST00000582331 FAM160B1Q5W0V3 765 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 B4GALNT3Q6L9W6 998 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 PPFIBP1Q86W92 1011 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 DCLK2Q8N568 766 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 CTCFLQ8NI51 663 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-205ENST00000582331 AUTS2Q8WXX7 1259 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 RIN2Q8WYP3 895 aaPredicted RBP8.67□□□□□ -1.02
CCDC47-205ENST00000582331 MAP3K14Q99558 947 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 LZTS2Q9BRK4 669 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 LNPKQ9C0E8 428 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 KIAA1468Q9P260 1216 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 IRAK3Q9Y616 596 aa8.67□□□□□ -1.02
CCDC47-205ENST00000582331 DNAH14Q0VDD8 3507 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 IGKV6D-21A0A0A0MT36 114 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 KRBA1A5PL33 1030 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 NARSO43776 548 aaKnown RBP8.66□□□□□ -1.02
CCDC47-205ENST00000582331 VTNP04004 478 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 CFHP08603 1231 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 SP9P0CG40 484 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 CTSAP10619 480 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 SDHBP21912 280 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 GNAQP50148 359 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 NONOQ15233 471 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC47-205ENST00000582331 CLLU1OSQ5K130 101 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 SPECC1Q5M775 1068 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 PDXDC2PQ6P474 469 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 RALYLQ86SE5 291 aaKnown RBP8.66□□□□□ -1.02
CCDC47-205ENST00000582331 METTL13Q8N6R0 699 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 ANKK1Q8NFD2 765 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 HELQQ8TDG4 1101 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 MRPL9Q9BYD2 267 aaKnown RBP8.66□□□□□ -1.02
CCDC47-205ENST00000582331 ZBP1Q9H171 429 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 SFXN1Q9H9B4 322 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 AGO4Q9HCK5 861 aaKnown RBP8.66□□□□□ -1.02
CCDC47-205ENST00000582331 CA14Q9ULX7 337 aa8.66□□□□□ -1.02
CCDC47-205ENST00000582331 A0A0U1RQF3 1178 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 CARNS1A5YM72 827 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 ZBTB42B2RXF5 422 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 C22orf31O95567 290 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 DCNP07585 359 aaKnown RBP8.65□□□□□ -1.02
CCDC47-205ENST00000582331 EIF4BP23588 611 aaKnown RBP8.65□□□□□ -1.02
CCDC47-205ENST00000582331 NLRP11P59045 1033 aaKnown RBP8.65□□□□□ -1.02
CCDC47-205ENST00000582331 ITGB3BPQ13352 177 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-205ENST00000582331 HDAC1Q13547 482 aaPredicted RBP8.65□□□□□ -1.02
CCDC47-205ENST00000582331 LETM2Q2VYF4 491 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 ABHD15Q6UXT9 468 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 C15orf39Q6ZRI6 1047 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 DDX53Q86TM3 631 aaKnown RBP8.65□□□□□ -1.02
CCDC47-205ENST00000582331 C1orf210Q8IVY1 113 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 CKAP2LQ8IYA6 745 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 SRBD1Q8N5C6 995 aaKnown RBP8.65□□□□□ -1.02
CCDC47-205ENST00000582331 NCOA7Q8NI08 942 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 EXOC6Q8TAG9 804 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 FEZF2Q8TBJ5 459 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 IGDCC4Q8TDY8 1250 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 TBC1D17Q9HA65 648 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 ZNF302Q9NR11 478 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 SIT1Q9Y3P8 196 aa8.65□□□□□ -1.02
CCDC47-205ENST00000582331 DDX39AO00148 427 aaKnown RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 MAGEB2O15479 319 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 KINO60870 393 aaKnown RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 ZC3H11AO75152 810 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 DDAH1O94760 285 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 PLEKHA8P1O95397 391 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 CCNE2O96020 404 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 CYP21A2P08686 494 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 SRFP11831 508 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 ATP4AP20648 1035 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 KLRC2P26717 231 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 GBP2P32456 591 aaPredicted RBP8.64□□□□□ -1.03
CCDC47-205ENST00000582331 CEP55Q53EZ4 464 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 KIAA0319Q5VV43 1072 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 PHLDB3Q6NSJ2 640 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 SWSAP1Q6NVH7 229 aa8.64□□□□□ -1.03
CCDC47-205ENST00000582331 MIS18BP1Q6P0N0 1132 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms