RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 LETM1O95202 739 aaPredicted RBP10.53□□□□□ -0.72
RFFL-210ENST00000582308 SRGAP2CP0DJJ0 459 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 NMT1P30419 496 aaKnown RBP10.53□□□□□ -0.72
RFFL-210ENST00000582308 NLRP11P59045 1033 aaKnown RBP10.53□□□□□ -0.72
RFFL-210ENST00000582308 TLE2Q04725 743 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 TMEM62Q0P6H9 643 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 STK4Q13043 487 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 PSMD2Q13200 908 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 PTK7Q13308 1070 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 DMP1Q13316 513 aaPredicted RBP10.53□□□□□ -0.72
RFFL-210ENST00000582308 CAPSQ13938 189 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 PPP2R5AQ15172 486 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 LRRC26Q2I0M4 334 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 TRIM60Q495X7 471 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 FAM26FQ5R3K3 315 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 C1orf53Q5VUE5 145 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 RPAINQ86UA6 219 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 FAM178BQ8IXR5 827 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 SMYD4Q8IYR2 804 aaPredicted RBP10.53□□□□□ -0.72
RFFL-210ENST00000582308 NME8Q8N427 588 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 KIAA0895Q8NCT3 520 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 TET1Q8NFU7 2136 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 SPIRE2Q8WWL2 714 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 CCDC47Q96A33 483 aaKnown RBP10.53□□□□□ -0.72
RFFL-210ENST00000582308 IFT74Q96LB3 600 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 MAP7D2Q96T17 732 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 PPP1R16BQ96T49 567 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 KIFC3Q9BVG8 833 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 ADAMTS10Q9H324 1103 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 SLC39A2Q9NP94 309 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 OLFML3Q9NRN5 406 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 RMND1Q9NWS8 449 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 LARSQ9P2J5 1176 aaKnown RBP10.53□□□□□ -0.72
RFFL-210ENST00000582308 GDAQ9Y2T3 454 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 ADGRA3Q8IWK6 1321 aa10.53□□□□□ -0.72
RFFL-210ENST00000582308 A0A087WZ62 844 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 SYCE3A1L190 88 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 LRRIQ4A6NIV6 560 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 RBAK-RBAKDNI3L0D1 243 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 SLC16A4O15374 487 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 PPP1R37O75864 691 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 CHRNA1P02708 482 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 MAPTP10636 758 aaKnown RBP10.52□□□□□ -0.73
RFFL-210ENST00000582308 NAMPTP43490 491 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 GPC3P51654 580 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 CASP5P51878 434 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 NCKAP1LP55160 1127 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 NLRP12P59046 1061 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 POU5F1BQ06416 359 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 FAAP100Q0VG06 881 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 KIZQ2M2Z5 673 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 ZC2HC1CQ53FD0 456 aaPredicted RBP10.52□□□□□ -0.73
RFFL-210ENST00000582308 ZNF658Q5TYW1 1059 aaPredicted RBP10.52□□□□□ -0.73
RFFL-210ENST00000582308 EPM2AIP1Q7L775 607 aaPredicted RBP10.52□□□□□ -0.73
RFFL-210ENST00000582308 ZNF720Q7Z2F6 126 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 TRIML1Q8N9V2 468 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 RNF149Q8NC42 400 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 TMEM161BQ8NDZ6 487 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 NLRP4Q96MN2 994 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 TOX2Q96NM4 488 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 FDXACB1Q9BRP7 624 aaPredicted RBP10.52□□□□□ -0.73
RFFL-210ENST00000582308 FUCA2Q9BTY2 467 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 MRPL44Q9H9J2 332 aaKnown RBP10.52□□□□□ -0.73
RFFL-210ENST00000582308 IFT122Q9HBG6 1241 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 KMT5AQ9NQR1 393 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 ARHGAP28Q9P2N2 729 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 NOD1Q9Y239 953 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 MROH7Q68CQ1 1323 aa10.52□□□□□ -0.73
RFFL-210ENST00000582308 DCDC2CA8MYV0 355 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 PPP1R3GB7ZBB8 358 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 CSDE1O75534 798 aaKnown RBP10.51□□□□□ -0.73
RFFL-210ENST00000582308 GCNT3O95395 438 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 MYBP10242 640 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 CD44P16070 742 aaKnown RBP10.51□□□□□ -0.73
RFFL-210ENST00000582308 HOXD13P35453 343 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 THPOP40225 353 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 PRCPP42785 496 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 SMTNP53814 917 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 PTENP60484 403 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 MRPS6P82932 125 aaKnown RBP10.51□□□□□ -0.73
RFFL-210ENST00000582308 CDC42EP1Q00587 391 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 TYRO3Q06418 890 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 MGAT3Q09327 533 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 TFDP1Q14186 410 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 CDCA2Q69YH5 1023 aaPredicted RBP10.51□□□□□ -0.73
RFFL-210ENST00000582308 TRAF7Q6Q0C0 670 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 SASS6Q6UVJ0 657 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 TAS1R3Q7RTX0 852 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 HAUS6Q7Z4H7 955 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 RSPH3Q86UC2 560 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 IFNLR1Q8IU57 520 aaPredicted RBP10.51□□□□□ -0.73
RFFL-210ENST00000582308 DEPTORQ8TB45 409 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 SCFD1Q8WVM8 642 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 NLRP7Q8WX94 980 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 KCNN1Q92952 543 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 CELF4Q9BZC1 486 aaKnown RBP10.51□□□□□ -0.73
RFFL-210ENST00000582308 ST6GALNAC4Q9H4F1 302 aa10.51□□□□□ -0.73
RFFL-210ENST00000582308 MINDY3Q9H8M7 445 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms