RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 SSRP1Q08945 709 aaKnown RBP6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 CCDC144BQ3MJ40 725 aa6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 FAM209AQ5JX71 171 aa6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 COLEC12Q5KU26 742 aa6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 CATSPEREQ5SY80 951 aa6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 MFSD5Q6N075 450 aa6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 DLG3Q92796 817 aa6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 CDK11AQ9UQ88 783 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-207ENST00000581711 ZNF37AP17032 561 aaPredicted RBP6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 GABREP78334 506 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 TMEM132BQ14DG7 1078 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 SOGA3Q5TF21 947 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 HECTD2Q5U5R9 776 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 FOXB2Q5VYV0 432 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 TOR3AQ9H497 397 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 PIF1Q9H611 641 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 ZSWIM4Q9H7M6 989 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 RCAN3Q9UKA8 241 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 KDM2BQ8NHM5 1336 aa6.69□□□□□ -1.34
SMCHD1-207ENST00000581711 B3GALT2O43825 422 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 MFAP3LO75121 409 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 PPFIA4O75335 1185 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 FAM153BP0C7A2 387 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 RANGAP1P46060 587 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 OLFML1Q6UWY5 402 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 RTN4RL1Q86UN2 441 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 MDGA1Q8NFP4 955 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 OR5AN1Q8NGI8 311 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 NKD2Q969F2 451 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 FOXRED1Q96CU9 486 aaPredicted RBP6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 FOXB1Q99853 325 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 SYNPO2LQ9H987 977 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 COL4A3Q01955 1670 aa6.68□□□□□ -1.34
SMCHD1-207ENST00000581711 IPO13O94829 963 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 TOX4O94842 621 aa6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 CD38P28907 300 aa6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 ANTXR2P58335 489 aa6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 STRIP1Q5VSL9 837 aa6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 NAIF1Q69YI7 327 aaPredicted RBP6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 BEND2Q8NDZ0 799 aa6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 MKL1Q969V6 931 aa6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 ZNF512Q96ME7 567 aaPredicted RBP6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 IPO9Q96P70 1041 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 COQ6Q9Y2Z9 468 aa6.67□□□□□ -1.34
SMCHD1-207ENST00000581711 A0A0A6YYK5 440 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-207ENST00000581711 RASGRP1O95267 797 aa6.66□□□□□ -1.34
SMCHD1-207ENST00000581711 VSIG10L2P0DP72 767 aa6.66□□□□□ -1.34
SMCHD1-207ENST00000581711 CLEC14AQ86T13 490 aa6.66□□□□□ -1.34
SMCHD1-207ENST00000581711 LILRB2Q8N423 598 aa6.66□□□□□ -1.34
SMCHD1-207ENST00000581711 SLC12A8A0AV02 714 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 KIAA0355O15063 1070 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 DGKDQ16760 1214 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 KRT40Q6A162 431 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 ZBTB38Q8NAP3 1195 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 PLA2G15Q8NCC3 412 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 CPT1CQ8TCG5 803 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 ARL8AQ96BM9 186 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 EXOC2Q96KP1 924 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 CELF4Q9BZC1 486 aaKnown RBP6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 KANSL2Q9H9L4 492 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 SORCS3Q9UPU3 1222 aa6.65□□□□□ -1.34
SMCHD1-207ENST00000581711 HIP1RO75146 1068 aa6.64□□□□□ -1.35
SMCHD1-207ENST00000581711 ZFP36P26651 326 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-207ENST00000581711 RGS3P49796 1198 aa6.64□□□□□ -1.35
SMCHD1-207ENST00000581711 TIGD2Q4W5G0 525 aa6.64□□□□□ -1.35
SMCHD1-207ENST00000581711 PLEKHG4Q58EX7 1191 aa6.64□□□□□ -1.35
SMCHD1-207ENST00000581711 LRP10Q7Z4F1 713 aa6.64□□□□□ -1.35
SMCHD1-207ENST00000581711 ST8SIA2Q92186 375 aa6.64□□□□□ -1.35
SMCHD1-207ENST00000581711 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 INO80B-WBP1J3KQ70 363 aa6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 PRLP01236 227 aa6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 JUNP05412 331 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 CLK3P49761 638 aaKnown RBP6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 SLC6A3Q01959 620 aa6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 NFE2L2Q16236 605 aa6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 DCAF17Q5H9S7 520 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 OVCH1Q7RTY7 1134 aa6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 CXorf67Q86X51 503 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 MRFAP1L1Q96HT8 127 aa6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 INO80BQ9C086 356 aaPredicted RBP6.63□□□□□ -1.35
SMCHD1-207ENST00000581711 IGSF3O75054 1194 aa6.62□□□□□ -1.35
SMCHD1-207ENST00000581711 GNAT2P19087 354 aa6.62□□□□□ -1.35
SMCHD1-207ENST00000581711 IRF9Q00978 393 aa6.62□□□□□ -1.35
SMCHD1-207ENST00000581711 ROM1Q03395 351 aa6.62□□□□□ -1.35
SMCHD1-207ENST00000581711 WDR92Q96MX6 357 aa6.62□□□□□ -1.35
SMCHD1-207ENST00000581711 CYP4F11Q9HBI6 524 aa6.62□□□□□ -1.35
SMCHD1-207ENST00000581711 NCDNQ9UBB6 729 aa6.62□□□□□ -1.35
SMCHD1-207ENST00000581711 RECQL4O94761 1208 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 SCAF4O95104 1147 aaKnown RBP6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 HK1P19367 917 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 SPIDRQ14159 915 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 Q6YL49 198 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 CMTM4Q8IZR5 234 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 E2F7Q96AV8 911 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 DYDC2Q96IM9 177 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 DHRS4Q9BTZ2 278 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 R3HDMLQ9H3Y0 253 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 SLC52A2Q9HAB3 445 aa6.61□□□□□ -1.35
SMCHD1-207ENST00000581711 POLR3BQ9NW08 1133 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms