RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TUFT1Q9NNX1 390 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 CHST12Q9NRB3 414 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 DACT1Q9NYF0 836 aa21.75■■□□□ 1.07
SREBF1-220ENST00000581707 XIRP2A4UGR9 3374 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 MYO7AQ13402 2215 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 TBKBP1A7MCY6 615 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 ASAP2O43150 1006 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 SRGAP2CP0DJJ0 459 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 SPATA31C1P0DKV0 1188 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 FGFR1P11362 822 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 TOB1P50616 345 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-220ENST00000581707 CATSPER3Q86XQ3 398 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 ECHDC2Q86YB7 292 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 C4orf32Q8N8J7 132 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 ERMNQ8TAM6 284 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 SYMPKQ92797 1274 aaKnown RBP21.74■■□□□ 1.07
SREBF1-220ENST00000581707 CCDC43Q96MW1 224 aaKnown RBP21.74■■□□□ 1.07
SREBF1-220ENST00000581707 COG5Q9UP83 839 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 SMC3Q9UQE7 1217 aa21.74■■□□□ 1.07
SREBF1-220ENST00000581707 KIAA1671Q9BY89 1806 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 BRWD1Q9NSI6 2320 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 SPTBN5Q9NRC6 3674 aaKnown RBP21.73■■□□□ 1.07
SREBF1-220ENST00000581707 A0A087WWV3 80 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 A0A0U1RQF3 1178 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 H3BQV1 296 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 GRM6O15303 877 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 RARRES1P49788 294 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 TFF2Q03403 129 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 NAALADL2Q58DX5 795 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 CATSPER4Q7RTX7 472 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 FERMT3Q86UX7 667 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 P2RX5Q93086 422 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 HLA-CQ95604 372 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 POLR3CQ9BUI4 534 aaPredicted RBP21.73■■□□□ 1.07
SREBF1-220ENST00000581707 LMAN2LQ9H0V9 348 aa21.73■■□□□ 1.07
SREBF1-220ENST00000581707 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.73■■□□□ 1.07
SREBF1-220ENST00000581707 TTC28Q96AY4 2481 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 HOXA2O43364 376 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 MED24O75448 989 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 DGAT1O75907 488 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 MXD4Q14582 209 aaPredicted RBP21.72■■□□□ 1.07
SREBF1-220ENST00000581707 AAK1Q2M2I8 961 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 TIGD5Q53EQ6 642 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 SPOUT1Q5T280 376 aaKnown RBP21.72■■□□□ 1.07
SREBF1-220ENST00000581707 SRGAP1Q7Z6B7 1085 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 RNF149Q8NC42 400 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 RNF169Q8NCN4 708 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 XPNPEP1Q9NQW7 623 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 PLAGL2Q9UPG8 496 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 PIN4Q9Y237 131 aaKnown RBP21.72■■□□□ 1.07
SREBF1-220ENST00000581707 PCDHB6Q9Y5E3 794 aa21.72■■□□□ 1.07
SREBF1-220ENST00000581707 EOMESO95936 686 aa21.71■■□□□ 1.07
SREBF1-220ENST00000581707 RPA1P27694 616 aa21.71■■□□□ 1.07
SREBF1-220ENST00000581707 FXR2P51116 673 aaKnown RBP eCLIP21.71■■□□□ 1.07
SREBF1-220ENST00000581707 PTGDRQ13258 359 aa21.71■■□□□ 1.07
SREBF1-220ENST00000581707 TWF2Q6IBS0 349 aaKnown RBP21.71■■□□□ 1.07
SREBF1-220ENST00000581707 NACC1Q96RE7 527 aa21.71■■□□□ 1.07
SREBF1-220ENST00000581707 TMEM117Q9H0C3 514 aa21.71■■□□□ 1.07
SREBF1-220ENST00000581707 ALG13Q9NP73 1137 aaKnown RBP21.71■■□□□ 1.07
SREBF1-220ENST00000581707 RNF19AQ9NV58 838 aa21.71■■□□□ 1.07
SREBF1-220ENST00000581707 TYW1Q9NV66 732 aaKnown RBP21.71■■□□□ 1.07
SREBF1-220ENST00000581707 PHKA2P46019 1235 aa21.7■■□□□ 1.06
SREBF1-220ENST00000581707 ZNF598Q86UK7 904 aaKnown RBP21.7■■□□□ 1.06
SREBF1-220ENST00000581707 ABI1Q8IZP0 508 aa21.7■■□□□ 1.06
SREBF1-220ENST00000581707 KLHL23Q8NBE8 558 aa21.7■■□□□ 1.06
SREBF1-220ENST00000581707 CASD1Q96PB1 797 aa21.7■■□□□ 1.06
SREBF1-220ENST00000581707 TRAIPQ9BWF2 469 aa21.7■■□□□ 1.06
SREBF1-220ENST00000581707 NSUN3Q9H649 340 aaKnown RBP21.7■■□□□ 1.06
SREBF1-220ENST00000581707 MINDY3Q9H8M7 445 aa21.7■■□□□ 1.06
SREBF1-220ENST00000581707 AAASQ9NRG9 546 aa21.7■■□□□ 1.06
SREBF1-220ENST00000581707 DBR1Q9UK59 544 aaKnown RBP21.7■■□□□ 1.06
SREBF1-220ENST00000581707 PCDHB12Q9Y5F1 795 aa21.7■■□□□ 1.06
SREBF1-220ENST00000581707 ITGB1P05556 798 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 SKIP12755 728 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 ARL2P36404 184 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 TFDP1Q14186 410 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 PDIA5Q14554 519 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 RILPL1Q5EBL4 403 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 TCEAL5Q5H9L2 206 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 LARP1BQ659C4 914 aaKnown RBP21.69■■□□□ 1.06
SREBF1-220ENST00000581707 POTEGQ6S5H5 508 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 SPPL3Q8TCT6 385 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 AGPAT5Q9NUQ2 364 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 LRWD1Q9UFC0 647 aa21.69■■□□□ 1.06
SREBF1-220ENST00000581707 LAD1O00515 517 aa21.68■■□□□ 1.06
SREBF1-220ENST00000581707 USO1O60763 962 aaKnown RBP21.68■■□□□ 1.06
SREBF1-220ENST00000581707 ATF7P17544 494 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-220ENST00000581707 MUTP22033 750 aa21.68■■□□□ 1.06
SREBF1-220ENST00000581707 CLLU1OSQ5K130 101 aa21.68■■□□□ 1.06
SREBF1-220ENST00000581707 HAUS3Q68CZ6 603 aa21.68■■□□□ 1.06
SREBF1-220ENST00000581707 RAB34Q9BZG1 259 aa21.68■■□□□ 1.06
SREBF1-220ENST00000581707 CWH43Q9H720 699 aa21.68■■□□□ 1.06
SREBF1-220ENST00000581707 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.68■■□□□ 1.06
SREBF1-220ENST00000581707 HCSTQ9UBK5 93 aa21.68■■□□□ 1.06
SREBF1-220ENST00000581707 ATG2AQ2TAZ0 1938 aa21.67■■□□□ 1.06
SREBF1-220ENST00000581707 DNAJB1P25685 340 aa21.67■■□□□ 1.06
SREBF1-220ENST00000581707 CCT6AP40227 531 aaKnown RBP21.67■■□□□ 1.06
SREBF1-220ENST00000581707 PTENP60484 403 aa21.67■■□□□ 1.06
SREBF1-220ENST00000581707 POU5F1BQ06416 359 aa21.67■■□□□ 1.06
SREBF1-220ENST00000581707 CUL4AQ13619 759 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms