RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 LOXHD1Q8IVV2 1947 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 A0A0U1RQF3 1178 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 VWA3AA6NCI4 1184 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 ZNF623O75123 536 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 EOMESO95936 686 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 STAG3L1P0CL83 205 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 GLRA2P23416 452 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 HOXA11P31270 313 aaPredicted RBP14.04□□□□□ -0.16
SNORD55-201ENST00000581525 NASPP49321 788 aaPredicted RBP14.04□□□□□ -0.16
SNORD55-201ENST00000581525 GRB10Q13322 594 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 TMEM119Q4V9L6 283 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 PADI6Q6TGC4 694 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 KCNK18Q7Z418 384 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 ZNF598Q86UK7 904 aaKnown RBP14.04□□□□□ -0.16
SNORD55-201ENST00000581525 SAMD11Q96NU1 681 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 PPP1R16BQ96T49 567 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 CCSER1Q9C0I3 900 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 NT5C3AQ9H0P0 336 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 MINDY3Q9H8M7 445 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 DDX19AQ9NUU7 478 aaKnown RBP14.04□□□□□ -0.16
SNORD55-201ENST00000581525 TMEM161AQ9NX61 479 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 GBF1Q92538 1859 aa14.04□□□□□ -0.16
SNORD55-201ENST00000581525 CSDE1O75534 798 aaKnown RBP14.03□□□□□ -0.16
SNORD55-201ENST00000581525 ZSCAN22P10073 491 aaPredicted RBP14.03□□□□□ -0.16
SNORD55-201ENST00000581525 ZSCAN20P17040 1043 aaPredicted RBP14.03□□□□□ -0.16
SNORD55-201ENST00000581525 SFPQP23246 707 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNORD55-201ENST00000581525 CAPSQ13938 189 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 AMHR2Q16671 573 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 ATL3Q6DD88 541 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 FAM173BQ6P4H8 233 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 C1orf186Q6ZWK4 172 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 SYT2Q8N9I0 419 aaPredicted RBP14.03□□□□□ -0.16
SNORD55-201ENST00000581525 RNF149Q8NC42 400 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 ASAP3Q8TDY4 903 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 ZNF668Q96K58 619 aaPredicted RBP14.03□□□□□ -0.16
SNORD55-201ENST00000581525 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 TGS1Q96RS0 853 aaKnown RBP14.03□□□□□ -0.16
SNORD55-201ENST00000581525 USP28Q96RU2 1077 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 BHMT2Q9H2M3 363 aa14.03□□□□□ -0.16
SNORD55-201ENST00000581525 FBXO2Q9UK22 296 aaPredicted RBP14.03□□□□□ -0.16
SNORD55-201ENST00000581525 ARID2Q68CP9 1835 aa14.02□□□□□ -0.16
SNORD55-201ENST00000581525 DENND3A2RUS2 1198 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 ARHGEF35A5YM69 484 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 E9PMD0 336 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 C5orf67F2Z3F1 127 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 LPXNO60711 386 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 USO1O60763 962 aaKnown RBP14.02□□□□□ -0.17
SNORD55-201ENST00000581525 UPP2O95045 317 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 SRGAP2CP0DJJ0 459 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 FGFR4P22455 802 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 AXLP30530 894 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 GRIN1Q05586 938 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 TFDP1Q14186 410 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 ADGRE1Q14246 886 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 FAM187BQ17R55 369 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 CDCA2Q69YH5 1023 aaPredicted RBP14.02□□□□□ -0.17
SNORD55-201ENST00000581525 MRPL10Q7Z7H8 261 aaKnown RBP14.02□□□□□ -0.17
SNORD55-201ENST00000581525 ECHDC2Q86YB7 292 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 CMTR2Q8IYT2 770 aaKnown RBP14.02□□□□□ -0.17
SNORD55-201ENST00000581525 LINC00301Q8NCQ3 95 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 MYLIPQ8WY64 445 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 RSPH1Q8WYR4 309 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 KCNN1Q92952 543 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 YME1L1Q96TA2 773 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 NTPCRQ9BSD7 190 aaKnown RBP14.02□□□□□ -0.17
SNORD55-201ENST00000581525 TIPINQ9BVW5 301 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 PRDM12Q9H4Q4 367 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 AGPAT5Q9NUQ2 364 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 RNF19AQ9NV58 838 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 DACT1Q9NYF0 836 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 LMCD1Q9NZU5 365 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 KCND2Q9NZV8 630 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 PCDHB7Q9Y5E2 793 aa14.02□□□□□ -0.17
SNORD55-201ENST00000581525 PRUNE2Q8WUY3 3088 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 ADGRA3Q8IWK6 1321 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 EPOPA6NHQ4 379 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 PPP6R2O75170 966 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 ATF7P17544 494 aaPredicted RBP14.01□□□□□ -0.17
SNORD55-201ENST00000581525 GUCY2CP25092 1073 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 PHKA2P46019 1235 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 SLC12A3P55017 1021 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 MBTD1Q05BQ5 628 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 MAPK7Q13164 816 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 RINT1Q6NUQ1 792 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 FAM117BQ6P1L5 589 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 SPRED2Q7Z698 418 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 CABP7Q86V35 215 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 DAW1Q8N136 415 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 KIFAP3Q92845 792 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 NLRP4Q96MN2 994 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 POLR3FQ9H1D9 316 aaPredicted RBP14.01□□□□□ -0.17
SNORD55-201ENST00000581525 FZD8Q9H461 694 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 C17orf75Q9HAS0 396 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 GPRC5CQ9NQ84 441 aa14.01□□□□□ -0.17
SNORD55-201ENST00000581525 YEATS4O95619 227 aa14□□□□□ -0.17
SNORD55-201ENST00000581525 BRD1O95696 1058 aa14□□□□□ -0.17
SNORD55-201ENST00000581525 F13A1P00488 732 aa14□□□□□ -0.17
SNORD55-201ENST00000581525 RB1P06400 928 aa14□□□□□ -0.17
SNORD55-201ENST00000581525 SKIP12755 728 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 433.1 ms