RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZNF888P0CJ79 500 aaPredicted RBP6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 CD40P25942 277 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 POLD1P28340 1107 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 FNTBP49356 437 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 SCAND1P57086 179 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 GPR158Q5T848 1215 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 OTOP2Q7RTS6 562 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 ZZZ3Q8IYH5 903 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 Q8TCH9 128 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 JDP2Q8WYK2 163 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 MRIQ9BWK5 157 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 ZDHHC5Q9C0B5 715 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 CD248Q9HCU0 757 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 THRAP3Q9Y2W1 955 aaKnown RBP6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 NR2E1Q9Y466 385 aa6.33□□□□□ -1.4
SMCHD1-205ENST00000581383 PRAMEF22A3QJZ6 481 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 GOLGA6L22H0YM25 854 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 CDC14BO60729 498 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 AOAHP28039 575 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 MC4RP32245 332 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 ADCY8P40145 1251 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 KCNQ1P51787 676 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 ERVK-21P61565 698 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 TTF1Q15361 905 aaPredicted RBP6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 EPHA7Q15375 998 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 TCTN3Q6NUS6 607 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 FRMD7Q6ZUT3 714 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 DNERQ8NFT8 737 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 NEIL1Q96FI4 390 aaPredicted RBP6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 SORCS2Q96PQ0 1159 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 OR14A2Q96R54 314 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 MENTQ9BUN1 341 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 MEGF9Q9H1U4 602 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 UCKL1Q9NWZ5 548 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 BTBD7Q9P203 1132 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 MSRAQ9UJ68 235 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 PTPN22Q9Y2R2 807 aa6.32□□□□□ -1.4
SMCHD1-205ENST00000581383 TNKSO95271 1327 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 GOLGA8AA7E2F4 631 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 GOLGA8BA8MQT2 603 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 CYR61O00622 381 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 KDM1AO60341 852 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 IL18BPO95998 194 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 HMGCRP04035 888 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 IARSP41252 1262 aaKnown RBP6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 MEOX1P50221 254 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 KLF1Q13351 362 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 PDCD1Q15116 288 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 ABCB5Q2M3G0 1257 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 RTN4RL1Q86UN2 441 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 NME9Q86XW9 330 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 RAVER1Q8IY67 606 aaKnown RBP6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 CBARPQ8N350 705 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 C7orf31Q8N865 590 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 FOXRED1Q96CU9 486 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 TUBGCP5Q96RT8 1024 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 ZNF747Q9BV97 191 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 SCAND2PQ9GZW5 306 aaPredicted RBP6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 FAM184BQ9ULE4 1060 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 ASB1Q9Y576 335 aa6.31□□□□□ -1.4
SMCHD1-205ENST00000581383 WASHC2AQ641Q2 1341 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 UBA6A0AVT1 1052 aaPredicted RBP6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 K7ESF4 209 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 FOXS1O43638 330 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 APOL3O95236 402 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 MT-CO1P00395 513 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 MYBL2P10244 700 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 CR2P20023 1033 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 COMTP21964 271 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 PTGS1P23219 599 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 NEK2P51955 445 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 ADCY1Q08828 1119 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 CDSNQ15517 529 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 PTPN21Q16825 1174 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 RTKN2Q8IZC4 609 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 ANO3Q9BYT9 981 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 POFUT1Q9H488 388 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 INCENPQ9NQS7 918 aa6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 PUF60Q9UHX1 559 aaKnown RBP6.3□□□□□ -1.4
SMCHD1-205ENST00000581383 MARCH6O60337 910 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 PARNO95453 639 aaKnown RBP6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 SLC6A3Q01959 620 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 NOLC1Q14978 699 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 INAVAQ3KP66 663 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 TTC38Q5R3I4 469 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 TIGD7Q6NT04 549 aaPredicted RBP6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 PGM2L1Q6PCE3 622 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 CRIP3Q6Q6R5 217 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 PHYKPLQ8IUZ5 450 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 TGFBRAP1Q8WUH2 860 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 LMBR1Q8WVP7 490 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 E2F7Q96AV8 911 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 FAM89AQ96GI7 184 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 MYL10Q9BUA6 226 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 KATNBL1Q9H079 304 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 AASDHPPTQ9NRN7 309 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 KCNG1Q9UIX4 513 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 FBXO10Q9UK96 956 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 CDC42EP3Q9UKI2 254 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 TESMINQ9Y4I5 508 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms