RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 IGKV6-21A0A0C4DH24 114 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 HIDE1A8MVS5 230 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 M0R2N6 131 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 EPB41L2O43491 1005 aaKnown RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 CHMP2AO43633 222 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 STBD1O95210 358 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 SRGAP2BP0DMP2 458 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 HOXB8P17481 243 aaPredicted RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 XKR3Q5GH77 459 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 CLLU1OSQ5K130 101 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 ANKRD54Q6NXT1 300 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 RUFY3Q7L099 469 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 FAM177A1Q8N128 213 aaPredicted RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 MRPL43Q8N983 215 aaKnown RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 NKD2Q969F2 451 aaPredicted RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 GJA10Q969M2 543 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 ZNF274Q96GC6 653 aaPredicted RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 ZNF668Q96K58 619 aaPredicted RBP11.94□□□□□ -0.5
RFFL-209ENST00000581265 MBOAT7Q96N66 472 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 CEP89Q96ST8 783 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 PCDHA4Q9UN74 947 aa11.94□□□□□ -0.5
RFFL-209ENST00000581265 DNM2P50570 870 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
RFFL-209ENST00000581265 DRP2Q13474 957 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 TOB2Q14106 344 aaPredicted RBP11.93□□□□□ -0.5
RFFL-209ENST00000581265 PLPP4Q5VZY2 271 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 GALNT17Q6IS24 598 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 SYCE2Q6PIF2 218 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 MOXD1Q6UVY6 613 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 MIER3Q7Z3K6 550 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 TMC7Q7Z402 723 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 ADSSL1Q8N142 457 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 SLC39A11Q8N1S5 342 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 NLRP7Q8WX94 980 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 RSPH1Q8WYR4 309 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 GCOM2Q9BZD3 368 aaPredicted RBP11.93□□□□□ -0.5
RFFL-209ENST00000581265 ENTPD7Q9NQZ7 604 aa11.93□□□□□ -0.5
RFFL-209ENST00000581265 WDR81Q562E7 1941 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 MAFO75444 373 aaPredicted RBP11.92□□□□□ -0.5
RFFL-209ENST00000581265 CSDE1O75534 798 aaKnown RBP11.92□□□□□ -0.5
RFFL-209ENST00000581265 DEXIO95424 95 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 FGFR4P22455 802 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 PBX3P40426 434 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 TECP42680 631 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 ALDH7A1P49419 539 aaKnown RBP11.92□□□□□ -0.5
RFFL-209ENST00000581265 NPY5RQ15761 445 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 BLIDQ8IZY5 108 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 DAGLBQ8NCG7 672 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 RNF169Q8NCN4 708 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 ETNPPLQ8TBG4 499 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 HELQQ8TDG4 1101 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 SCLT1Q96NL6 688 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 MRPL9Q9BYD2 267 aaKnown RBP11.92□□□□□ -0.5
RFFL-209ENST00000581265 TM6SF1Q9BZW5 370 aa11.92□□□□□ -0.5
RFFL-209ENST00000581265 INO80BQ9C086 356 aaPredicted RBP11.92□□□□□ -0.5
RFFL-209ENST00000581265 A0A087WZ62 844 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 CARNS1A5YM72 827 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 C2orf71A6NGG8 1288 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 CPLX1O14810 134 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 ZNF623O75123 536 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 TDP2O95551 362 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 SKIP12755 728 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 NBL1P41271 181 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 PHKA2P46019 1235 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 BCAR1P56945 870 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 SMC1AQ14683 1233 aaKnown RBP11.91□□□□□ -0.5
RFFL-209ENST00000581265 MTERF2Q49AM1 385 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 ANO5Q75V66 913 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 FRMD5Q7Z6J6 570 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 ZNF410Q86VK4 478 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 CASP10Q92851 521 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 ASIC4Q96FT7 647 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 FDXACB1Q9BRP7 624 aaPredicted RBP11.91□□□□□ -0.5
RFFL-209ENST00000581265 SUCLA2Q9P2R7 463 aaPredicted RBP11.91□□□□□ -0.5
RFFL-209ENST00000581265 SEPT9Q9UHD8 586 aaPredicted RBP11.91□□□□□ -0.5
RFFL-209ENST00000581265 HCFC2Q9Y5Z7 792 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 CYP46A1Q9Y6A2 500 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 CACNA1HO95180 2353 aa11.91□□□□□ -0.5
RFFL-209ENST00000581265 TMEM150BA6NC51 233 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 DDX11L8A8MPP1 907 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 CLASP2O75122 1294 aaKnown RBP11.9□□□□□ -0.5
RFFL-209ENST00000581265 KRT37O76014 449 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 SFPQP23246 707 aaKnown RBP eCLIP11.9□□□□□ -0.5
RFFL-209ENST00000581265 PSMC5P62195 406 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 ITIH3Q06033 890 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
RFFL-209ENST00000581265 NONOQ15233 471 aaKnown RBP eCLIP11.9□□□□□ -0.5
RFFL-209ENST00000581265 PTPN21Q16825 1174 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 TPRNQ4KMQ1 711 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 LLGL2Q6P1M3 1020 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 CPLX2Q6PUV4 134 aaKnown RBP11.9□□□□□ -0.5
RFFL-209ENST00000581265 DGLUCYQ7Z3D6 616 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 RIPOR3Q96MK2 946 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 JPH2Q9BR39 696 aaPredicted RBP11.9□□□□□ -0.5
RFFL-209ENST00000581265 SH2D3AQ9BRG2 576 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 ADAM7Q9H2U9 754 aa11.9□□□□□ -0.5
RFFL-209ENST00000581265 DDX25Q9UHL0 483 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms