RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ERFEQ4G0M1 354 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 FAM160B2Q86V87 743 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 PARD3BQ8TEW8 1205 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 ADA2Q9NZK5 511 aa15.49■□□□□ 0.07
CSNK1D-217ENST00000581241 ARHGEF37A1IGU5 675 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 DIAPH2O60879 1101 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 OSBPP22059 807 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 PRELPP51888 382 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 PEX3P56589 373 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 PDIA2Q13087 525 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 SEMA3FQ13275 785 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 NAA30Q147X3 362 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 PDXDC1Q6P996 788 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 CCDC137Q6PK04 289 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 BHMT2Q9H2M3 363 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 INPP5FQ9Y2H2 1132 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 MORF4L2Q15014 288 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 TBC1D10CQ8IV04 446 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 DDX47Q9H0S4 455 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 AARSP49588 968 aaKnown RBP eCLIP15.48■□□□□ 0.075e-7■■■■■ 34.9
CSNK1D-217ENST00000581241 SLC26A7Q8TE54 656 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 MTBPQ96DY7 904 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 KIAA1586Q9HCI6 787 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 SERPINB13Q9UIV8 391 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 TMEM2Q9UHN6 1383 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 ASAP2O43150 1006 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 FAM83BQ5T0W9 1011 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 PPP1R18Q6NYC8 613 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 KLHL8Q9P2G9 620 aaPredicted RBP15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 ANGPTL8Q6UXH0 198 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 ZBED8Q8IZ13 594 aa15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 STX18Q9P2W9 335 aaKnown RBP15.48■□□□□ 0.07
CSNK1D-217ENST00000581241 DNAJC6O75061 913 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 RFX1P22670 979 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 RCAN1P53805 252 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 ROR1Q01973 937 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 GPS1Q13098 491 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 NCAPHQ15003 741 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 KRT27Q7Z3Y8 459 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 TMC4Q7Z404 712 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 SPDYE1Q8NFV5 336 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 RNF139Q8WU17 664 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 BTBD6Q96KE9 485 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 KCNF1Q9H3M0 494 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 HACD3Q9P035 362 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 ARL2BPQ9Y2Y0 163 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 EIF4E1BA6NMX2 242 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 TEX33O43247 280 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 ATP11CQ8NB49 1132 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 PRAMEF22A3QJZ6 481 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 ANP32DO95626 131 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 AGTP01019 485 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 IRX1P78414 480 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 RWDD4Q6NW29 188 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 PASD1Q8IV76 773 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 TTC8Q8TAM2 541 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 PCDHA6Q9UN73 950 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 PCDHA8Q9Y5H6 950 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 CFAP69A5D8W1 941 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 TMEM247A6NEH6 219 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 EIF3HO15372 352 aaKnown RBP eCLIP15.47■□□□□ 0.078e-7■■■■□ 21.6
CSNK1D-217ENST00000581241 SERPINB2P05120 415 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 HOXA13P31271 388 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 VSNL1P62760 191 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 CAPRIN1Q14444 709 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 MAPRE2Q15555 327 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 KNOP1Q1ED39 458 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 SYDE1Q6ZW31 735 aaPredicted RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 TMEM35BQ8NCS4 154 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 COG4Q9H9E3 785 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 UBE4BO95155 1302 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 RNF103-CHMP3A0A140T963 221 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 PSMC1P62191 440 aaKnown RBP15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 SUFUQ9UMX1 484 aa15.47■□□□□ 0.07
CSNK1D-217ENST00000581241 PFASO15067 1338 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 TTC26A0AVF1 554 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 KRT4P19013 534 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 CUL3Q13618 768 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 LONP2Q86WA8 852 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 PPM1NQ8N819 430 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 ATP6V0A4Q9HBG4 840 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 TTC7AQ9ULT0 858 aaPredicted RBP15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 HIC1Q14526 733 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 DGKHQ86XP1 1220 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 OXER1Q8TDS5 423 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 SNX19Q92543 992 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 ABCF3Q9NUQ8 709 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 ARHGAP26Q9UNA1 814 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 SRGAP2CP0DJJ0 459 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 KRT17Q04695 432 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 STAT4Q14765 748 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 IZUMO3Q5VZ72 239 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 STRBPQ96SI9 672 aaKnown RBP15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 CCDC90BQ9GZT6 254 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 LY9Q9HBG7 655 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 PITPNM2Q9BZ72 1349 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 KDM1AO60341 852 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 ZNF667Q5HYK9 610 aa15.46■□□□□ 0.07
CSNK1D-217ENST00000581241 FLAD1Q8NFF5 587 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms