RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 STAMQ92783 540 aa16.73■□□□□ 0.27
MKS1-210ENST00000581180 ZNF668Q96K58 619 aaPredicted RBP16.73■□□□□ 0.27
MKS1-210ENST00000581180 OSMRQ99650 979 aa16.73■□□□□ 0.27
MKS1-210ENST00000581180 FDXACB1Q9BRP7 624 aaPredicted RBP16.73■□□□□ 0.27
MKS1-210ENST00000581180 IFT122Q9HBG6 1241 aa16.73■□□□□ 0.27
MKS1-210ENST00000581180 ODF2LQ9ULJ1 636 aa16.73■□□□□ 0.27
MKS1-210ENST00000581180 SQORQ9Y6N5 450 aa16.73■□□□□ 0.27
MKS1-210ENST00000581180 H0YGN5 161 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 CSF2RAP15509 400 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 ZNF131P52739 623 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
MKS1-210ENST00000581180 LPIN1Q14693 890 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 KRBA2Q6ZNG9 492 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 CEP57L1Q8IYX8 460 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 PAGE5Q96GU1 130 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 DRC1Q96MC2 740 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 NLRP4Q96MN2 994 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 TRIM9Q9C026 710 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 C17orf75Q9HAS0 396 aa16.72■□□□□ 0.27
MKS1-210ENST00000581180 FRMD3A2A2Y4 597 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 SFI1A8K8P3 1242 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 NR1I2O75469 434 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 SRGAP2CP0DJJ0 459 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 DARSP14868 501 aaKnown RBP16.71■□□□□ 0.27
MKS1-210ENST00000581180 EIF4BP23588 611 aaKnown RBP16.71■□□□□ 0.27
MKS1-210ENST00000581180 NAMPTP43490 491 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 PTENP60484 403 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 AMPD3Q01432 767 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 DYMQ7RTS9 669 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 GRAMD1CQ8IYS0 662 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 RNF149Q8NC42 400 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 NLRP7Q8WX94 980 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 NFKBIZQ9BYH8 718 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 LRRC27Q9C0I9 530 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 AGO3Q9H9G7 860 aaKnown RBP16.71■□□□□ 0.27
MKS1-210ENST00000581180 GINS2Q9Y248 185 aa16.71■□□□□ 0.27
MKS1-210ENST00000581180 NOC2LQ9Y3T9 749 aaKnown RBP16.71■□□□□ 0.27
MKS1-210ENST00000581180 TTC3P53804 2025 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
MKS1-210ENST00000581180 GHRP10912 638 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 PLS3P13797 630 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 MAGEA10P43363 369 aaPredicted RBP16.7■□□□□ 0.26
MKS1-210ENST00000581180 AFMP43652 599 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 EPHB4P54760 987 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 MDM2Q00987 491 aaPredicted RBP16.7■□□□□ 0.26
MKS1-210ENST00000581180 FPGSQ05932 587 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 PPIGQ13427 754 aaKnown RBP eCLIP16.7■□□□□ 0.264e-6■□□□□ 8.2
MKS1-210ENST00000581180 TFDP1Q14186 410 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 PPP2R5AQ15172 486 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 PLEKHG4Q58EX7 1191 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
MKS1-210ENST00000581180 TSHZ1Q6ZSZ6 1077 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 C16orf59Q7L2K0 433 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 SRGAP1Q7Z6B7 1085 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 CNNM3Q8NE01 707 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 IFT74Q96LB3 600 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 TIGD1Q96MW7 591 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 LBHD1Q9BQE6 289 aaPredicted RBP16.7■□□□□ 0.26
MKS1-210ENST00000581180 NTPCRQ9BSD7 190 aaKnown RBP16.7■□□□□ 0.26
MKS1-210ENST00000581180 GCOM2Q9BZD3 368 aaPredicted RBP16.7■□□□□ 0.26
MKS1-210ENST00000581180 MINDY3Q9H8M7 445 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 IL23AQ9NPF7 189 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 PTPRSQ13332 1948 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 ADGRA3Q8IWK6 1321 aa16.7■□□□□ 0.26
MKS1-210ENST00000581180 FAM13AO94988 1023 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 PFKMP08237 780 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 CASP1P29466 404 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 NPTX2P47972 431 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 PEX3P56589 373 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 CUL4BQ13620 913 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 TCTN1Q2MV58 587 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 FAM228AQ86W67 206 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 RPUSD2Q8IZ73 545 aaKnown RBP16.69■□□□□ 0.26
MKS1-210ENST00000581180 SPIRE2Q8WWL2 714 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 KCNN1Q92952 543 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 SCLT1Q96NL6 688 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 FIZ1Q96SL8 496 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 GDF15Q99988 308 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 PARVGQ9HBI0 331 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 ERVK-5Q9HDB9 667 aa16.69■□□□□ 0.26
MKS1-210ENST00000581180 LRRIQ4A6NIV6 560 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 GOLGA6L22H0YM25 854 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 GTPBP6O43824 516 aaPredicted RBP16.68■□□□□ 0.26
MKS1-210ENST00000581180 TBCAO75347 108 aaKnown RBP16.68■□□□□ 0.26
MKS1-210ENST00000581180 CSDE1O75534 798 aaKnown RBP16.68■□□□□ 0.26
MKS1-210ENST00000581180 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 MYL1P05976 194 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 ACRP10323 421 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 CD52P31358 61 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 PHKA2P46019 1235 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 MBTD1Q05BQ5 628 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 DMP1Q13316 513 aaPredicted RBP16.68■□□□□ 0.26
MKS1-210ENST00000581180 KANK3Q6NY19 840 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 DBF4BQ8NFT6 615 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 KIFC3Q9BVG8 833 aa16.68■□□□□ 0.26
MKS1-210ENST00000581180 IFIH1Q9BYX4 1025 aaKnown RBP16.68■□□□□ 0.26
MKS1-210ENST00000581180 INO80BQ9C086 356 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms