RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 PLCB4Q15147 1175 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 LRRC41Q15345 812 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 KNOP1Q1ED39 458 aaKnown RBP8.79□□□□□ -1
KPNB1-210ENST00000580573 TCP11X2Q5H9J9 407 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 ODR4Q5SWX8 454 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 GJC2Q5T442 439 aaPredicted RBP8.79□□□□□ -1
KPNB1-210ENST00000580573 METTL3Q86U44 580 aaKnown RBP8.79□□□□□ -1
KPNB1-210ENST00000580573 SLC9A9Q8IVB4 645 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 FAM178BQ8IXR5 827 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 C12orf56Q8IXR9 622 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 EXOC8Q8IYI6 725 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 MYCT1Q8N699 235 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 CSGALNACT2Q8N6G5 542 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 LINC01465Q8N7H1 131 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 TRIB2Q92519 343 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 CEP63Q96MT8 703 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 CTAGE1Q96RT6 745 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 TRIM5Q9C035 493 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 XPO4Q9C0E2 1151 aaKnown RBP8.79□□□□□ -1
KPNB1-210ENST00000580573 AZI2Q9H6S1 392 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 ATP6V0A4Q9HBG4 840 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 NRBP2Q9NSY0 501 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 TYW1Q9NV66 732 aaKnown RBP8.79□□□□□ -1
KPNB1-210ENST00000580573 ERAP1Q9NZ08 941 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 ARHGAP28Q9P2N2 729 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 ADGRG1Q9Y653 693 aa8.79□□□□□ -1
KPNB1-210ENST00000580573 SFI1A8K8P3 1242 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 CBFA2T2O43439 604 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 HBP1O60381 514 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 F2P00734 622 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 CYP2B6P20813 491 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 PTGS1P23219 599 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 NMT1P30419 496 aaKnown RBP8.78□□□□□ -1
KPNB1-210ENST00000580573 CYP2C19P33261 490 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 ABCD1P33897 745 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 FLT3LGP49771 235 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 FKBP3Q00688 224 aaKnown RBP8.78□□□□□ -1
KPNB1-210ENST00000580573 TNFAIP2Q03169 654 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 PRKCZQ05513 592 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 NR1I3Q14994 352 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 KRT31Q15323 416 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 MAP3K21Q5TCX8 1036 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 STXBP4Q6ZWJ1 553 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 TRIM50Q86XT4 487 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 FAM114A1Q8IWE2 563 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 TMEM161BQ8NDZ6 487 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 TRPV1Q8NER1 839 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 AFG1LQ8WV93 481 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 BSNDQ8WZ55 320 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 CCDC43Q96MW1 224 aaKnown RBP8.78□□□□□ -1
KPNB1-210ENST00000580573 NAP1L5Q96NT1 182 aaPredicted RBP8.78□□□□□ -1
KPNB1-210ENST00000580573 SH2D3AQ9BRG2 576 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 FAM117AQ9C073 453 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 UPF3AQ9H1J1 476 aaKnown RBP8.78□□□□□ -1
KPNB1-210ENST00000580573 MRPL44Q9H9J2 332 aaKnown RBP8.78□□□□□ -1
KPNB1-210ENST00000580573 GPRC5CQ9NQ84 441 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 DMAC2Q9NW81 257 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 TBC1D7Q9P0N9 293 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 IFNKQ9P0W0 207 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 CGNQ9P2M7 1197 aaKnown RBP8.78□□□□□ -1
KPNB1-210ENST00000580573 KCNG1Q9UIX4 513 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 ZHX1Q9UKY1 873 aaPredicted RBP8.78□□□□□ -1
KPNB1-210ENST00000580573 GABRQQ9UN88 632 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 ADGRA3Q8IWK6 1321 aa8.78□□□□□ -1
KPNB1-210ENST00000580573 KCNJ18B7U540 433 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 GPR25O00155 361 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 HAS3O00219 553 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 SORBS3O60504 671 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 DUSP11O75319 330 aaKnown RBP8.77□□□□□ -1.01
KPNB1-210ENST00000580573 PRPF6O94906 941 aaKnown RBP8.77□□□□□ -1.01
KPNB1-210ENST00000580573 GCNT3O95395 438 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 C22orf31O95567 290 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 FGFR1OPO95684 399 aaKnown RBP8.77□□□□□ -1.01
KPNB1-210ENST00000580573 TBC1D8O95759 1140 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 PIGRP01833 764 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 AKR1A1P14550 325 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 HOXC8P31273 242 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 NAMPTP43490 491 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 NPTX2P47972 431 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 UBASH3AP57075 661 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 KCNA1Q09470 495 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 KCNJ12Q14500 433 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 DGKDQ16760 1214 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 MTERF2Q49AM1 385 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 ZC2HC1CQ53FD0 456 aaPredicted RBP8.77□□□□□ -1.01
KPNB1-210ENST00000580573 ZNF484Q5JVG2 852 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 MIIPQ5JXC2 388 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 CDCA2Q69YH5 1023 aaPredicted RBP8.77□□□□□ -1.01
KPNB1-210ENST00000580573 HAUS6Q7Z4H7 955 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 FILIP1Q7Z7B0 1213 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 MAP4K3Q8IVH8 894 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 VSTM4Q8IW00 320 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 SLC7A3Q8WY07 619 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 CNOT6LQ96LI5 555 aaKnown RBP8.77□□□□□ -1.01
KPNB1-210ENST00000580573 TSG101Q99816 390 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 JPH2Q9BR39 696 aaPredicted RBP8.77□□□□□ -1.01
KPNB1-210ENST00000580573 MKNK1Q9BUB5 465 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 SRRTQ9BXP5 876 aaKnown RBP8.77□□□□□ -1.01
KPNB1-210ENST00000580573 IMPACTQ9P2X3 320 aa8.77□□□□□ -1.01
KPNB1-210ENST00000580573 SRRDQ9UH36 339 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms