RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 CCDC169A6NNP5 214 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 CD4P01730 458 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 SOX10P56693 466 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 TLE2Q04725 743 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 RBL2Q08999 1139 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 STRN3Q13033 797 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 PNOCQ13519 176 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 CAMK4Q16566 473 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 CAVIN1Q6NZI2 390 aaKnown RBP12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 UBE2Q1Q7Z7E8 422 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 USP38Q8NB14 1042 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 LRRC15Q8TF66 581 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 DNAJB3Q8WWF6 145 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 STAMQ92783 540 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 HVCN1Q96D96 273 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 NLRP4Q96MN2 994 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 TRPV6Q9H1D0 765 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 BLZF1Q9H2G9 400 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 MRPL44Q9H9J2 332 aaKnown RBP12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 DACH1Q9UI36 760 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 EXOC7Q9UPT5 735 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 TRPV2Q9Y5S1 764 aa12.97□□□□□ -0.33
SNORD3C-201ENST00000580533 UBE4BO95155 1302 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 K7ENM7 598 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 RHOBTB3O94955 611 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 SELPP16109 830 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 MRE11P49959 708 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 GPC3P51654 580 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 CRYBB1P53674 252 aaPredicted RBP12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 PEX3P56589 373 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 ZNF200P98182 395 aaPredicted RBP12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 MDM2Q00987 491 aaPredicted RBP12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 COASYQ13057 564 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 HSP90AA2PQ14568 343 aaPredicted RBP12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 FAM26FQ5R3K3 315 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 NT5DC1Q5TFE4 455 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 SASS6Q6UVJ0 657 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 RUFY4Q6ZNE9 571 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 APBB1IPQ7Z5R6 666 aaPredicted RBP12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 SRGAP1Q7Z6B7 1085 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 GRAMD1CQ8IYS0 662 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 RNF149Q8NC42 400 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 NTPCRQ9BSD7 190 aaKnown RBP12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 CELF4Q9BZC1 486 aaKnown RBP12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 HIPK3Q9H422 1215 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 SQORQ9Y6N5 450 aa12.96□□□□□ -0.33
SNORD3C-201ENST00000580533 NPHP3-ACAD11A0A0J9YXS1 232 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 RSPH10B2B2RC85 870 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 ERLIN2O94905 339 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 VTNP04004 478 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 RSPH10BP0C881 870 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 SRGAP2CP0DJJ0 459 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 GLRA2P23416 452 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 RFC2P35250 354 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 NPTX2P47972 431 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 NLRP11P59045 1033 aaKnown RBP12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 MAPK7Q13164 816 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 CAPSQ13938 189 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 MAPK6Q16659 721 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 LRRC26Q2I0M4 334 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 KMT5BQ4FZB7 885 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 SPATA20Q8TB22 786 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 ASAP3Q8TDY4 903 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 PRIMPOLQ96LW4 560 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 ST6GALNAC4Q9H4F1 302 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 GPRC5CQ9NQ84 441 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 PRMT7Q9NVM4 692 aaPredicted RBP12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 PCDHA5Q9Y5H7 936 aa12.95□□□□□ -0.34
SNORD3C-201ENST00000580533 KIAA0100Q14667 2235 aaKnown RBP12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 K7ERI5 159 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 EIF3DO15371 548 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 EVI5O60447 810 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 GCNT3O95395 438 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 CKBP12277 381 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 KCNA4P22459 653 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 EIF4BP23588 611 aaKnown RBP12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 NCKAP1LP55160 1127 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 FAAP100Q0VG06 881 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 TMEM132AQ24JP5 1023 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 KIZQ2M2Z5 673 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 FAM26DQ5JW98 314 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 ZNF658Q5TYW1 1059 aaPredicted RBP12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 CDCA2Q69YH5 1023 aaPredicted RBP12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 LRRC8DQ7L1W4 858 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 SFR1Q86XK3 245 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 DAW1Q8N136 415 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 PPP1R13LQ8WUF5 828 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 KCNN1Q92952 543 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 TMEM134Q9H6X4 195 aa12.94□□□□□ -0.34
SNORD3C-201ENST00000580533 PRDM5Q9NQX1 630 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms