RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 FRMD4BQ9Y2L6 1034 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 PAK2Q13177 524 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 NBPF9Q3BBW0 867 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 ARHGAP27Q6ZUM4 889 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 OLIG1Q8TAK6 271 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 CAPS2Q9BXY5 557 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 THAP2Q9H0W7 228 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 KCNH7Q9NS40 1196 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 CCPG1Q9ULG6 757 aa11.4□□□□□ -0.58
TOP3A-209ENST00000580095 TTI1O43156 1089 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 DAPK3O43293 454 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 CALCAP01258 141 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 GAP43P17677 238 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 HPDP32754 393 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 SOX5P35711 763 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 SOX10P56693 466 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 GUCY1A3Q02108 690 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 PPP2R5CQ13362 524 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 PADI6Q6TGC4 694 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 OGFOD1Q8N543 542 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 RNF217Q8TC41 542 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 NACC1Q96RE7 527 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 ZNF341Q9BYN7 854 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 GPR88Q9GZN0 384 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 LRRC4CQ9HCJ2 640 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 ATRNL1Q5VV63 1379 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 C10orf71Q711Q0 1435 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 SLC16A3O15427 465 aaKnown RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 ATMINO43313 823 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 PPP1R12BO60237 982 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 FGGP02679 453 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 IVLP07476 585 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 VIL1P09327 827 aaKnown RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 ALAS1P13196 640 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 EIF2AK2P19525 551 aaKnown RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 GUCY2CP25092 1073 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 TNNC1P63316 161 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 MYL7Q01449 175 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 SPP2Q13103 211 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 MAPK7Q13164 816 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 STYK1Q6J9G0 422 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 VPS36Q86VN1 386 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 CPNE8Q86YQ8 564 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 BCAS4Q8TDM0 211 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 CAVIN3Q969G5 261 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 SH3GL2Q99962 352 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 TRIM51Q9BSJ1 452 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 TUFT1Q9NNX1 390 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 UBE2TQ9NPD8 197 aaPredicted RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 TMOD4Q9NZQ9 345 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 BZW2Q9Y6E2 419 aaKnown RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 QSER1Q2KHR3 1735 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 CNTNAP1P78357 1384 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 PRKCIP41743 596 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 CEP85LQ5SZL2 805 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 NT5DC3Q86UY8 548 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 ARHGEF19Q8IW93 802 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 IQCKQ8N0W5 287 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 CNKSR1Q969H4 720 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 FAM107BQ9H098 131 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 VCPKMTQ9H867 229 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 RAVER2Q9HCJ3 691 aaKnown RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 HERC5Q9UII4 1024 aaKnown RBP11.39□□□□□ -0.59
TOP3A-209ENST00000580095 COG5Q9UP83 839 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 PLAAQ9Y263 795 aa11.39□□□□□ -0.59
TOP3A-209ENST00000580095 EMSYQ7Z589 1322 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 PGRMC1O00264 195 aaKnown RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 OPA1O60313 960 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 EGFRP00533 1210 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 MYCLP12524 364 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 NPEPPSP55786 919 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 SP4Q02446 784 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 PPP3CAQ08209 521 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 ITGB3BPQ13352 177 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 GLE1Q53GS7 698 aaKnown RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 PLA2G4FQ68DD2 849 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 MIER3Q7Z3K6 550 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 CHURC1Q8WUH1 139 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 POP1Q99575 1024 aaKnown RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 TEKT3Q9BXF9 490 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 RNF14Q9UBS8 474 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 FZD1Q9UP38 647 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 MRPL11Q9Y3B7 192 aaKnown RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 FRMPD4Q14CM0 1322 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 BACH1O14867 736 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 ECHS1P30084 290 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 HOXA7P31268 230 aaPredicted RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 UGCGQ16739 394 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 DCAF12L1Q5VU92 463 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 GLG1Q92896 1179 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 CCDC127Q96BQ5 260 aa11.38□□□□□ -0.59
TOP3A-209ENST00000580095 RNPC3Q96LT9 517 aaKnown RBP11.38□□□□□ -0.59
TOP3A-209ENST00000580095 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.38□□□□□ -0.595e-7■■■□□ 17.1
TOP3A-209ENST00000580095 RASSF4Q9H2L5 321 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms