RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 PHKG2P15735 406 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 MSX2P35548 267 aaPredicted RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 HTR3AP46098 478 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 PPM1FP49593 454 aaPredicted RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 NEK4P51957 841 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 FOXL1Q12952 345 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 CNGB1Q14028 1251 aaPredicted RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 DHCR24Q15392 516 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 SLC10A6Q3KNW5 377 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 MINDY4Q4G0A6 757 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 L1TD1Q5T7N2 865 aaKnown RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 CCDC70Q6NSX1 233 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 HDGFL2Q7Z4V5 671 aaPredicted RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 SGMS1Q86VZ5 419 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 PPFIBP1Q86W92 1011 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 SPATS2Q86XZ4 545 aaKnown RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 SPICE1Q8N0Z3 855 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 TEX19Q8NA77 164 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 PJA1Q8NG27 643 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 SPATA3Q8NHX4 192 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 JPH3Q8WXH2 748 aaPredicted RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 RTFDC1Q9BY42 306 aaPredicted RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 CCDC8Q9H0W5 538 aaPredicted RBP3.87□□□□□ -1.79
KPNB1-208ENST00000580019 OBP2AQ9NY56 170 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 ZNF69Q9UC07 566 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 TAGLN3Q9UI15 199 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 LZTS1Q9Y250 596 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 PTPN22Q9Y2R2 807 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 COX11Q9Y6N1 276 aa3.87□□□□□ -1.79
KPNB1-208ENST00000580019 TRBV23-1A0A0A0MS06 115 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 ANO9A1A5B4 782 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 VSTM5A8MXK1 200 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 CYP27B1O15528 508 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 ZEB2O60315 1214 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 TCEA3O75764 348 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 FBXO21O94952 628 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 ZNF888P0CJ79 500 aaPredicted RBP3.86□□□□□ -1.79
KPNB1-208ENST00000580019 NAT2P11245 290 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 SDSP20132 328 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 POU3F2P20265 443 aaPredicted RBP3.86□□□□□ -1.79
KPNB1-208ENST00000580019 PTGS2P35354 604 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 FLT3P36888 993 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 HSP90AA2PQ14568 343 aaPredicted RBP3.86□□□□□ -1.79
KPNB1-208ENST00000580019 STAT4Q14765 748 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 RNF151Q2KHN1 245 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 DPY19L1Q2PZI1 675 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 FAM209AQ5JX71 171 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 SYDE2Q5VT97 1194 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 EFCAB2Q5VUJ9 269 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 IL31Q6EBC2 164 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 KIAA1211LQ6NV74 962 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 UNC5AQ6ZN44 842 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 CPXCR1Q8N123 301 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 ARRDC4Q8NCT1 418 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.86□□□□□ -1.79
KPNB1-208ENST00000580019 WASF1Q92558 559 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 USP7Q93009 1102 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 EXOC2Q96KP1 924 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 CLUHP3Q96NS8 147 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 TTC1Q99614 292 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 SARGQ9BW04 601 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 CARD11Q9BXL7 1154 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 C12orf65Q9H3J6 166 aaKnown RBP3.86□□□□□ -1.79
KPNB1-208ENST00000580019 NRDE2Q9H7Z3 1164 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 MSL2Q9HCI7 577 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 BTG4Q9NY30 223 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 PUF60Q9UHX1 559 aaKnown RBP3.86□□□□□ -1.79
KPNB1-208ENST00000580019 RCAN3Q9UKA8 241 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 TRHDEQ9UKU6 1024 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 DAAM1Q9Y4D1 1078 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 PPP2R3BQ9Y5P8 575 aa3.86□□□□□ -1.79
KPNB1-208ENST00000580019 RSF1Q96T23 1441 aaPredicted RBP3.86□□□□□ -1.79
KPNB1-208ENST00000580019 RASSF10A6NK89 507 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 RPS6KA4O75676 772 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 ABLIM3O94929 683 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 TP53P04637 393 aaPredicted RBP3.85□□□□□ -1.79
KPNB1-208ENST00000580019 APPP05067 770 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 CCND1P24385 295 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 CASP2P42575 452 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 ZNF143P52747 638 aaPredicted RBP3.85□□□□□ -1.79
KPNB1-208ENST00000580019 SUMO1P63165 101 aaKnown RBP3.85□□□□□ -1.79
KPNB1-208ENST00000580019 SLC7A5Q01650 507 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 CHRNA2Q15822 529 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 SV2CQ496J9 727 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 FAM83BQ5T0W9 1011 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 FOXB2Q5VYV0 432 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 ZNF280DQ6N043 979 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 CCDC174Q6PII3 467 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 ZNF354CQ86Y25 554 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 PDILTQ8N807 584 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 CNTD1Q8N815 330 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 ANKRD42Q8N9B4 389 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 SCARB1Q8WTV0 552 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 ELAC2Q9BQ52 826 aaKnown RBP3.85□□□□□ -1.79
KPNB1-208ENST00000580019 HERPUD2Q9BSE4 406 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 AARSD1Q9BTE6 412 aaKnown RBP3.85□□□□□ -1.79
KPNB1-208ENST00000580019 RHOBTB2Q9BYZ6 727 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 IFT22Q9H7X7 185 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 PTPRHQ9HD43 1115 aa3.85□□□□□ -1.79
KPNB1-208ENST00000580019 IP6K2Q9UHH9 426 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms