RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 GCOM2Q9BZD3 368 aaPredicted RBP16.28■□□□□ 0.2
ITGB4-206ENST00000579662 SLC8A2Q9UPR5 921 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 SETD1BQ9UPS6 1966 aaKnown RBP16.28■□□□□ 0.2
ITGB4-206ENST00000579662 NFX1Q12986 1120 aaKnown RBP16.28■□□□□ 0.2
ITGB4-206ENST00000579662 MUM1Q2TAK8 710 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 MMEL1Q495T6 779 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 TMEM270Q6UE05 265 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 CERKQ8TCT0 537 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 HSPH1Q92598 858 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 TUBB6Q9BUF5 446 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 KIF9Q9HAQ2 790 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 SMYD2Q9NRG4 433 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 UBE4BO95155 1302 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 GRID2IPA4D2P6 1211 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 HMGB1P1B2RPK0 211 aaPredicted RBP16.28■□□□□ 0.2
ITGB4-206ENST00000579662 NFKBIAP25963 317 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 TSPY1Q01534 308 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 SRRM1Q8IYB3 904 aaKnown RBP16.28■□□□□ 0.2
ITGB4-206ENST00000579662 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
ITGB4-206ENST00000579662 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
ITGB4-206ENST00000579662 ZNF18P17022 549 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 SLC8A1P32418 973 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 EN1Q05925 392 aaPredicted RBP16.27■□□□□ 0.2
ITGB4-206ENST00000579662 NNTQ13423 1086 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 JADE1Q6IE81 842 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 RHPN2Q8IUC4 686 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 DHX38Q92620 1227 aaKnown RBP16.27■□□□□ 0.2
ITGB4-206ENST00000579662 NOC2LQ9Y3T9 749 aaKnown RBP16.27■□□□□ 0.2
ITGB4-206ENST00000579662 HOXD10P28358 340 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 HAUS8Q9BT25 410 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 KCND2Q9NZV8 630 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 PFASO15067 1338 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 IFNAR2P48551 515 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 PYROXD1Q8WU10 500 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 DEPDC1BQ8WUY9 529 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 NUDCD1Q96RS6 583 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 WDR70Q9NW82 654 aa16.27■□□□□ 0.2
ITGB4-206ENST00000579662 PP2D1A8MPX8 630 aa16.27■□□□□ 0.19
ITGB4-206ENST00000579662 ZRANB2O95218 330 aaKnown RBP eCLIP16.27■□□□□ 0.19
ITGB4-206ENST00000579662 TWF2Q6IBS0 349 aaKnown RBP16.27■□□□□ 0.19
ITGB4-206ENST00000579662 NGRNQ9NPE2 291 aaKnown RBP16.27■□□□□ 0.19
ITGB4-206ENST00000579662 CHRNA5P30532 468 aa16.27■□□□□ 0.19
ITGB4-206ENST00000579662 GUCY1A2P33402 732 aa16.27■□□□□ 0.19
ITGB4-206ENST00000579662 PPARGP37231 505 aaPredicted RBP16.27■□□□□ 0.19
ITGB4-206ENST00000579662 MFSD14CQ5VZR4 134 aa16.27■□□□□ 0.19
ITGB4-206ENST00000579662 EP400NLQ6ZTU2 488 aa16.27■□□□□ 0.19
ITGB4-206ENST00000579662 KCTD17Q8N5Z5 321 aa16.27■□□□□ 0.19
ITGB4-206ENST00000579662 URGCPQ8TCY9 931 aa16.27■□□□□ 0.19
ITGB4-206ENST00000579662 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.19
ITGB4-206ENST00000579662 ZDHHC9Q9Y397 364 aa16.27■□□□□ 0.19
ITGB4-206ENST00000579662 IQGAP1P46940 1657 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 ZNF189O75820 626 aaPredicted RBP16.26■□□□□ 0.19
ITGB4-206ENST00000579662 RFX5P48382 616 aaPredicted RBP16.26■□□□□ 0.19
ITGB4-206ENST00000579662 COG2Q14746 738 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 BBS9Q3SYG4 887 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 CFAP61Q8NHU2 1237 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 IP6K2Q9UHH9 426 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 TRIP13Q15645 432 aaPredicted RBP16.26■□□□□ 0.19
ITGB4-206ENST00000579662 CDC42EP5Q6NZY7 148 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 RSBN1LQ6PCB5 846 aaPredicted RBP16.26■□□□□ 0.19
ITGB4-206ENST00000579662 HVCN1Q96D96 273 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 ARL4CP56559 192 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 CDO1Q16878 200 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 GTF3C2Q8WUA4 911 aaPredicted RBP16.26■□□□□ 0.19
ITGB4-206ENST00000579662 CFAP36Q96G28 342 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 CASP8Q14790 479 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 DRAP1Q14919 205 aaPredicted RBP16.26■□□□□ 0.19
ITGB4-206ENST00000579662 BAG5Q9UL15 447 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 KIDINS220Q9ULH0 1771 aa16.26■□□□□ 0.19
ITGB4-206ENST00000579662 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 CLCN6P51797 869 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 CDC42EP1Q00587 391 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 GFPT1Q06210 699 aaPredicted RBP16.25■□□□□ 0.19
ITGB4-206ENST00000579662 ZNF564Q8TBZ8 553 aaPredicted RBP16.25■□□□□ 0.19
ITGB4-206ENST00000579662 YWHABP31946 246 aaKnown RBP16.25■□□□□ 0.19
ITGB4-206ENST00000579662 TAP1Q03518 808 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 MTMR2Q13614 643 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 IQCB1Q15051 598 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 HAUS6Q7Z4H7 955 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 NDUFAF2Q8N183 169 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 FAM151AQ8WW52 585 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 LRGUKQ96M69 825 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 CYP26B1Q9NR63 512 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 ZNF70Q9UC06 446 aaPredicted RBP16.25■□□□□ 0.19
ITGB4-206ENST00000579662 PAMP19021 973 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 CCT5P48643 541 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 SATB1Q01826 763 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 PDIA6Q15084 440 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 FAF2Q96CS3 445 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 TEX13BQ9BXU2 312 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 DDX56Q9NY93 547 aaKnown RBP16.25■□□□□ 0.19
ITGB4-206ENST00000579662 CTNND1O60716 968 aaKnown RBP16.25■□□□□ 0.19
ITGB4-206ENST00000579662 GNA15P30679 374 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 HMGCS2P54868 508 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 C7orf25Q9BPX7 421 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 STAP1Q9ULZ2 295 aa16.25■□□□□ 0.19
ITGB4-206ENST00000579662 PLS3P13797 630 aa16.24■□□□□ 0.19
ITGB4-206ENST00000579662 SEPT6Q14141 434 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms