RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 STK17AQ9UEE5 414 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 ST3GAL5Q9UNP4 418 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 SLC4A7Q9Y6M7 1214 aa17.07■□□□□ 0.32
IFT20-208ENST00000578985 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
IFT20-208ENST00000578985 PHKA2P46019 1235 aa17.06■□□□□ 0.32
IFT20-208ENST00000578985 KCNJ6P48051 423 aa17.06■□□□□ 0.32
IFT20-208ENST00000578985 WDR5P61964 334 aaKnown RBP17.06■□□□□ 0.32
IFT20-208ENST00000578985 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
IFT20-208ENST00000578985 MCM6Q14566 821 aa17.06■□□□□ 0.32
IFT20-208ENST00000578985 HABP4Q5JVS0 413 aaKnown RBP17.06■□□□□ 0.32
IFT20-208ENST00000578985 KIFAP3Q92845 792 aa17.06■□□□□ 0.32
IFT20-208ENST00000578985 INO80BQ9C086 356 aaPredicted RBP17.06■□□□□ 0.32
IFT20-208ENST00000578985 IFT122Q9HBG6 1241 aa17.06■□□□□ 0.32
IFT20-208ENST00000578985 POLD4Q9HCU8 107 aa17.06■□□□□ 0.32
IFT20-208ENST00000578985 A0A087X0B3 334 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 HIP1RO75146 1068 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 CSDE1O75534 798 aaKnown RBP17.05■□□□□ 0.32
IFT20-208ENST00000578985 FGFR4P22455 802 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 GUCY2CP25092 1073 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 STAT6P42226 847 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 POU5F1BQ06416 359 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 CAPSQ13938 189 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 LRIT3Q3SXY7 679 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 RESP18Q5W5W9 173 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 FAM43BQ6ZT52 329 aaPredicted RBP17.05■□□□□ 0.32
IFT20-208ENST00000578985 SRGAP1Q7Z6B7 1085 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 GPBP1Q86WP2 473 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 PDILTQ8N807 584 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 LARP4BQ92615 738 aaKnown RBP17.05■□□□□ 0.32
IFT20-208ENST00000578985 IPO9Q96P70 1041 aaKnown RBP17.05■□□□□ 0.32
IFT20-208ENST00000578985 TIPINQ9BVW5 301 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 FTHL17Q9BXU8 183 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 GDPD2Q9HCC8 539 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 FAM13BQ9NYF5 915 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 KCND2Q9NZV8 630 aa17.05■□□□□ 0.32
IFT20-208ENST00000578985 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.04■□□□□ 0.32
IFT20-208ENST00000578985 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.04■□□□□ 0.32
IFT20-208ENST00000578985 LRRIQ4A6NIV6 560 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 ATP2A2P16615 1042 aaKnown RBP17.04■□□□□ 0.32
IFT20-208ENST00000578985 SFPQP23246 707 aaKnown RBP eCLIP17.04■□□□□ 0.32
IFT20-208ENST00000578985 PTENP60484 403 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 DEFB103AP81534 67 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 RAD51AP2Q09MP3 1159 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 PPP2R5AQ15172 486 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 NAALADL2Q58DX5 795 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 ARSHQ5FYA8 562 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 ADALQ6DHV7 355 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
IFT20-208ENST00000578985 BSNDQ8WZ55 320 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 IFT74Q96LB3 600 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 DRC1Q96MC2 740 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 SLC9A7Q96T83 725 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 TTC3P53804 2025 aa17.04■□□□□ 0.32
IFT20-208ENST00000578985 GBF1Q92538 1859 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 NPHP3-ACAD11A0A0J9YXS1 232 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.03■□□□□ 0.32
IFT20-208ENST00000578985 ENPP3O14638 875 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 AMHP03971 560 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 KRT18P05783 430 aaKnown RBP17.03■□□□□ 0.32
IFT20-208ENST00000578985 MAPK7Q13164 816 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 FAM109BQ6ICB4 259 aaPredicted RBP17.03■□□□□ 0.32
IFT20-208ENST00000578985 CATSPER4Q7RTX7 472 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 RTN4RL1Q86UN2 441 aaPredicted RBP17.03■□□□□ 0.32
IFT20-208ENST00000578985 IFNLR1Q8IU57 520 aaPredicted RBP17.03■□□□□ 0.32
IFT20-208ENST00000578985 DAW1Q8N136 415 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 PHOSPHO2Q8TCD6 241 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 LINC01599Q8WXQ3 324 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 MINDY3Q9H8M7 445 aa17.03■□□□□ 0.32
IFT20-208ENST00000578985 RANBP2P49792 3224 aaKnown RBP17.03■□□□□ 0.32
IFT20-208ENST00000578985 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 CMA1P23946 247 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 NAMPTP43490 491 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 DSC3Q14574 896 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 SV2BQ7L1I2 683 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 DEPTORQ8TB45 409 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 DHX58Q96C10 678 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 ADAM2Q99965 735 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 NFKBIZQ9BYH8 718 aa17.02■□□□□ 0.32
IFT20-208ENST00000578985 TSPYL2Q9H2G4 693 aaPredicted RBP17.02■□□□□ 0.32
IFT20-208ENST00000578985 DENND3A2RUS2 1198 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 SFI1A8K8P3 1242 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 INO80B-WBP1J3KQ70 363 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 POLR2DO15514 142 aaKnown RBP17.01■□□□□ 0.31
IFT20-208ENST00000578985 MGEA5O60502 916 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 ZSCAN20P17040 1043 aaPredicted RBP17.01■□□□□ 0.31
IFT20-208ENST00000578985 PEX3P56589 373 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 SMAD3P84022 425 aaKnown RBP17.01■□□□□ 0.31
IFT20-208ENST00000578985 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
IFT20-208ENST00000578985 MBTD1Q05BQ5 628 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 E2F4Q16254 413 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 HERC6Q8IVU3 1022 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 ZBTB8OSQ8IWT0 167 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 MYOCDQ8IZQ8 938 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 IQUBQ8NA54 791 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 C2orf40Q9H1Z8 148 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 CUEDC2Q9H467 287 aa17.01■□□□□ 0.31
IFT20-208ENST00000578985 C17orf75Q9HAS0 396 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms