RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 LRRC55Q6ZSA7 311 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 OTUD6AQ7L8S5 288 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 ADGRD2Q7Z7M1 963 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 KSR1Q8IVT5 923 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 C4orf19Q8IY42 314 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 EXOC8Q8IYI6 725 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 THNSL1Q8IYQ7 743 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 ZNF579Q8NAF0 562 aaKnown RBP17.79■□□□□ 0.44
CRLF3-203ENST00000578692 RNF169Q8NCN4 708 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 RGL1Q9NZL6 768 aa17.79■□□□□ 0.44
CRLF3-203ENST00000578692 LINC01565O15544 149 aa17.78■□□□□ 0.44
CRLF3-203ENST00000578692 COL9A1P20849 921 aa17.78■□□□□ 0.44
CRLF3-203ENST00000578692 SFPQP23246 707 aaKnown RBP eCLIP17.78■□□□□ 0.44
CRLF3-203ENST00000578692 SPIRE1Q08AE8 756 aa17.78■□□□□ 0.44
CRLF3-203ENST00000578692 RBM23Q86U06 439 aaKnown RBP17.78■□□□□ 0.44
CRLF3-203ENST00000578692 SLC7A3Q8WY07 619 aa17.78■□□□□ 0.44
CRLF3-203ENST00000578692 KHSRPQ92945 711 aaKnown RBP eCLIP17.78■□□□□ 0.44
CRLF3-203ENST00000578692 DYDC2Q96IM9 177 aa17.78■□□□□ 0.44
CRLF3-203ENST00000578692 LXNQ9BS40 222 aa17.78■□□□□ 0.44
CRLF3-203ENST00000578692 PCDHA12Q9UN75 941 aa17.78■□□□□ 0.44
CRLF3-203ENST00000578692 PPME1Q9Y570 386 aa17.78■□□□□ 0.44
CRLF3-203ENST00000578692 YWHABP31946 246 aaKnown RBP17.77■□□□□ 0.43
CRLF3-203ENST00000578692 SSTR3P32745 418 aaPredicted RBP17.77■□□□□ 0.43
CRLF3-203ENST00000578692 NRIP1P48552 1158 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 FOSBP53539 338 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 POLGP54098 1239 aaPredicted RBP17.77■□□□□ 0.43
CRLF3-203ENST00000578692 CTTNQ14247 550 aaKnown RBP17.77■□□□□ 0.43
CRLF3-203ENST00000578692 CLUL1Q15846 466 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 ZNF598Q86UK7 904 aaKnown RBP17.77■□□□□ 0.43
CRLF3-203ENST00000578692 DIS3L2Q8IYB7 885 aaKnown RBP17.77■□□□□ 0.43
CRLF3-203ENST00000578692 EFHBQ8N7U6 833 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 NLRP4Q96MN2 994 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 DHX33Q9H6R0 707 aaKnown RBP17.77■□□□□ 0.43
CRLF3-203ENST00000578692 ZSWIM4Q9H7M6 989 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 TLR9Q9NR96 1032 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 PRKAG3Q9UGI9 489 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 PUF60Q9UHX1 559 aaKnown RBP17.77■□□□□ 0.43
CRLF3-203ENST00000578692 NCOR1O75376 2440 aa17.77■□□□□ 0.43
CRLF3-203ENST00000578692 MBTPS2O43462 519 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 TBX10O75333 385 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 SLITRK3O94933 977 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 RFC5P40937 340 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 NDUFV1P49821 464 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 ERVFC1P60507 584 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 PLCB3Q01970 1234 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 ST3GAL1Q11201 340 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 CALCRLQ16602 461 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 XKR9Q5GH70 373 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 CLLU1OSQ5K130 101 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 PDE12Q6L8Q7 609 aaKnown RBP17.76■□□□□ 0.43
CRLF3-203ENST00000578692 KCNT2Q6UVM3 1135 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 CATSPER4Q7RTX7 472 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 TPH2Q8IWU9 490 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 LRRC43Q8N309 656 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 HELQQ8TDG4 1101 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 PRPF31Q8WWY3 499 aaKnown RBP17.76■□□□□ 0.43
CRLF3-203ENST00000578692 MRPS27Q92552 414 aaKnown RBP17.76■□□□□ 0.43
CRLF3-203ENST00000578692 TRAIPQ9BWF2 469 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 TLE6Q9H808 572 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 IFT122Q9HBG6 1241 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 CD207Q9UJ71 328 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 LIMCH1Q9UPQ0 1083 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 PCDHGC5Q9Y5F6 944 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 COL4A3BPQ9Y5P4 624 aa17.76■□□□□ 0.43
CRLF3-203ENST00000578692 PI4K2BG5E9Z4 385 aa17.75■□□□□ 0.43
CRLF3-203ENST00000578692 ZBTB39O15060 712 aa17.75■□□□□ 0.43
CRLF3-203ENST00000578692 SKIP12755 728 aa17.75■□□□□ 0.43
CRLF3-203ENST00000578692 ATF7P17544 494 aaPredicted RBP17.75■□□□□ 0.43
CRLF3-203ENST00000578692 PHKA2P46019 1235 aa17.75■□□□□ 0.43
CRLF3-203ENST00000578692 CYP4A11Q02928 519 aa17.75■□□□□ 0.43
CRLF3-203ENST00000578692 KRT17Q04695 432 aa17.75■□□□□ 0.43
CRLF3-203ENST00000578692 SMAD2Q15796 467 aaKnown RBP17.75■□□□□ 0.43
CRLF3-203ENST00000578692 TWF2Q6IBS0 349 aaKnown RBP17.75■□□□□ 0.43
CRLF3-203ENST00000578692 TMEM143Q96AN5 459 aa17.75■□□□□ 0.43
CRLF3-203ENST00000578692 ZNF558Q96NG5 402 aa17.75■□□□□ 0.43
CRLF3-203ENST00000578692 EIF2AK1Q9BQI3 630 aaKnown RBP17.75■□□□□ 0.43
CRLF3-203ENST00000578692 TTC12Q9H892 705 aaPredicted RBP17.75■□□□□ 0.43
CRLF3-203ENST00000578692 PIN4Q9Y237 131 aaKnown RBP17.75■□□□□ 0.43
CRLF3-203ENST00000578692 PER2O15055 1255 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 ASAP2O43150 1006 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 GAS2O43903 313 aaKnown RBP17.74■□□□□ 0.43
CRLF3-203ENST00000578692 SRGAP2CP0DJJ0 459 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 TXKP42681 527 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 TCP11Q8WWU5 503 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 PSPC1Q8WXF1 523 aaKnown RBP17.74■□□□□ 0.43
CRLF3-203ENST00000578692 MSLNLQ96KJ4 702 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 HSD17B14Q9BPX1 270 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 BMP2KQ9NSY1 1161 aaPredicted RBP17.74■□□□□ 0.43
CRLF3-203ENST00000578692 FAM105AQ9NUU6 356 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 SPG21Q9NZD8 308 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
CRLF3-203ENST00000578692 WNT7AO00755 349 aa17.73■□□□□ 0.43
CRLF3-203ENST00000578692 FSCN2O14926 492 aa17.73■□□□□ 0.43
CRLF3-203ENST00000578692 NEMFO60524 1076 aa17.73■□□□□ 0.43
CRLF3-203ENST00000578692 PPM1AP35813 382 aa17.73■□□□□ 0.43
CRLF3-203ENST00000578692 PBX3P40426 434 aa17.73■□□□□ 0.43
CRLF3-203ENST00000578692 ZP2Q05996 745 aa17.73■□□□□ 0.43
CRLF3-203ENST00000578692 LAMTOR4Q0VGL1 99 aa17.73■□□□□ 0.43
CRLF3-203ENST00000578692 SMAD4Q13485 552 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms