RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 INO80BQ9C086 356 aaPredicted RBP24.67■■□□□ 1.54
SMARCD2-206ENST00000577990 CSDE1O75534 798 aaKnown RBP24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 FGFR4P22455 802 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 SFPQP23246 707 aaKnown RBP eCLIP24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 MXD4Q14582 209 aaPredicted RBP24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 PTPAQ15257 358 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 PADI6Q6TGC4 694 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 MICALL1Q8N3F8 863 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 MCPH1Q8NEM0 835 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 AK8Q96MA6 479 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 YME1L1Q96TA2 773 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 ADAM2Q99965 735 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 IFT122Q9HBG6 1241 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 C1orf112Q9NSG2 853 aa24.66■■□□□ 1.54
SMARCD2-206ENST00000577990 MYH15Q9Y2K3 1946 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 SRGAP2CP0DJJ0 459 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 ARL2P36404 184 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 DSC3Q14574 896 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 NPAS4Q8IUM7 802 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 RNF149Q8NC42 400 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 ASAP3Q8TDY4 903 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 ARNTL2Q8WYA1 636 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 POLR3FQ9H1D9 316 aaPredicted RBP24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 BHMT2Q9H2M3 363 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 RGS18Q9NS28 235 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 DNM3Q9UQ16 869 aa24.65■■□□□ 1.54
SMARCD2-206ENST00000577990 ZSCAN22P10073 491 aaPredicted RBP24.64■■□□□ 1.54
SMARCD2-206ENST00000577990 SARSP49591 514 aaKnown RBP24.64■■□□□ 1.54
SMARCD2-206ENST00000577990 ZRSR1Q15695 479 aaKnown RBP24.64■■□□□ 1.54
SMARCD2-206ENST00000577990 HYIQ5T013 277 aa24.64■■□□□ 1.54
SMARCD2-206ENST00000577990 SP7Q8TDD2 431 aaPredicted RBP24.64■■□□□ 1.54
SMARCD2-206ENST00000577990 USP28Q96RU2 1077 aa24.64■■□□□ 1.54
SMARCD2-206ENST00000577990 COL4A6Q14031 1691 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 E9PMD0 336 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 EYA4O95677 639 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 STAG3L1P0CL83 205 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 ZSCAN20P17040 1043 aaPredicted RBP24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 CYP11B2P19099 503 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 LONP1P36776 959 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 CEBPZQ03701 1054 aaKnown RBP24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 GRIN1Q05586 938 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 TFDP1Q14186 410 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 FOXD4L5Q5VV16 416 aaPredicted RBP24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 SLC24A5Q71RS6 500 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 MAEAQ7L5Y9 396 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 SRGAP1Q7Z6B7 1085 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 CABP7Q86V35 215 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 FOXD4L4Q8WXT5 416 aaPredicted RBP24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 CDK5RAP3Q96JB5 506 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 PNMA5Q96PV4 448 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 NT5C3AQ9H0P0 336 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 XIRP2A4UGR9 3374 aa24.63■■□□□ 1.53
SMARCD2-206ENST00000577990 LINC01553A4QN01 128 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 C9IYK1 514 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 SLC26A4O43511 780 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 GLRA2P23416 452 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 PHKA2P46019 1235 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 CAPSQ13938 189 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 FAM102BQ5T8I3 360 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 CATSPER4Q7RTX7 472 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 CRIPAKQ8N1N5 446 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 KCTD17Q8N5Z5 321 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 RC3H2Q9HBD1 1191 aaKnown RBP24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 GPRC5CQ9NQ84 441 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 RNF216Q9NWF9 866 aaPredicted RBP24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 LRFN2Q9ULH4 789 aa24.62■■□□□ 1.53
SMARCD2-206ENST00000577990 F13A1P00488 732 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 IBSPP21815 317 aaPredicted RBP24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 MARCKSP29966 332 aaPredicted RBP24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 UBA7P41226 1012 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 PTENP60484 403 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 GRB10Q13322 594 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 BECN1Q14457 450 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 TMEM119Q4V9L6 283 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 KCNK18Q7Z418 384 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 MINDY3Q9H8M7 445 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 CHST12Q9NRB3 414 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 PCDHB7Q9Y5E2 793 aa24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 MORC2Q9Y6X9 1032 aaPredicted RBP24.61■■□□□ 1.53
SMARCD2-206ENST00000577990 DGKIO75912 1065 aa24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 FAM189BP81408 668 aa24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 POU5F1BQ06416 359 aa24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 PKP1Q13835 747 aa24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 IFNLR1Q8IU57 520 aaPredicted RBP24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 ZNF689Q96CS4 500 aaPredicted RBP24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 ZNF396Q96N95 335 aaPredicted RBP24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 TGS1Q96RS0 853 aaKnown RBP24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 PLIN2Q99541 437 aa24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 DACT1Q9NYF0 836 aa24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 FBXO2Q9UK22 296 aaPredicted RBP24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 MTUS1Q9ULD2 1270 aa24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 SRPRBQ9Y5M8 271 aaKnown RBP24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 ADGRA3Q8IWK6 1321 aa24.6■■□□□ 1.53
SMARCD2-206ENST00000577990 NASPP49321 788 aaPredicted RBP24.59■■□□□ 1.53
SMARCD2-206ENST00000577990 SLC39A14Q15043 492 aa24.59■■□□□ 1.53
SMARCD2-206ENST00000577990 CALML4Q96GE6 196 aa24.59■■□□□ 1.53
SMARCD2-206ENST00000577990 NFKBIZQ9BYH8 718 aa24.59■■□□□ 1.53
SMARCD2-206ENST00000577990 ELAC1Q9H777 363 aaKnown RBP24.59■■□□□ 1.53
SMARCD2-206ENST00000577990 TMEM161AQ9NX61 479 aa24.59■■□□□ 1.53
SMARCD2-206ENST00000577990 PIN4Q9Y237 131 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms