RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 TRDNQ13061 729 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 ZNF598Q86UK7 904 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 BCL7CQ8WUZ0 217 aaPredicted RBP16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 KLHL5Q96PQ7 755 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 MXRA8Q9BRK3 442 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 SPZ1Q9BXG8 430 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 DIAPH3Q9NSV4 1193 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 SPATA6Q9NWH7 488 aaPredicted RBP16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 FBXO4Q9UKT5 387 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 PCDHA6Q9UN73 950 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 SMG5Q9UPR3 1016 aaKnown RBP16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 PCDHGA2Q9Y5H1 932 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 PCDHA8Q9Y5H6 950 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 DOCK8Q8NF50 2099 aa16.06■□□□□ 0.16
PPP4R1-206ENST00000577779 SPEGQ15772 3267 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 CLUHO75153 1309 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 IGKV6D-21A0A0A0MT36 114 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 LAMTOR5O43504 91 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 LRRN2O75325 713 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 NLRP11P59045 1033 aaKnown RBP16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 ITGB3BPQ13352 177 aaPredicted RBP16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 COL9A2Q14055 689 aaPredicted RBP16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 WTAPQ15007 396 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 PDXDC2PQ6P474 469 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 CMASQ8NFW8 434 aaPredicted RBP16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 MYADMQ96S97 322 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 ZNF302Q9NR11 478 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 AKT3Q9Y243 479 aa16.05■□□□□ 0.16
PPP4R1-206ENST00000577779 CCDC195A0A1B0GUA6 201 aa16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 CNPP09543 421 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 EIF4BP23588 611 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 CSTF1Q05048 431 aaKnown RBP16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 PPM1JQ5JR12 505 aa16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 ABHD15Q6UXT9 468 aa16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 CCDC60Q8IWA6 550 aaPredicted RBP16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 SHDQ96IW2 340 aa16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 VN1R3Q9BXE9 311 aa16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 BCO2Q9BYV7 579 aa16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 MAN1C1Q9NR34 630 aa16.04■□□□□ 0.16
PPP4R1-206ENST00000577779 DDX39AO00148 427 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 CCNE2O96020 404 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 GALTP07902 379 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 KIF5BP33176 963 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 CLCN3P51790 818 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 SART3Q15020 963 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 ELMSAN1Q6PJG2 1045 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 RSPH1Q8WYR4 309 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 MAP7D2Q96T17 732 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 GBP3Q9H0R5 595 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 EPC1Q9H2F5 836 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 ADAMTS10Q9H324 1103 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 AGO4Q9HCK5 861 aaKnown RBP16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 SLC2A4RGQ9NR83 387 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 DACT1Q9NYF0 836 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 PATJQ8NI35 1801 aa16.03■□□□□ 0.16
PPP4R1-206ENST00000577779 SETXQ7Z333 2677 aaKnown RBP16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 STARD6P59095 220 aa16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 RNASELQ05823 741 aaKnown RBP16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 SWSAP1Q6NVH7 229 aa16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 CYP26C1Q6V0L0 522 aa16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 TRMT1LQ7Z2T5 733 aaKnown RBP16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 CTCFLQ8NI51 663 aaPredicted RBP16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 ZNF668Q96K58 619 aaPredicted RBP16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 SCLT1Q96NL6 688 aa16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 NRDE2Q9H7Z3 1164 aa16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 MRPL17Q9NRX2 175 aaKnown RBP16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 ZSCAN32Q9NX65 697 aa16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 STK39Q9UEW8 545 aa16.02■□□□□ 0.16
PPP4R1-206ENST00000577779 MYH9P35579 1960 aaKnown RBP16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 INPPL1O15357 1258 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 LAMP2P13473 410 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 ATP4AP20648 1035 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 FGFR4P22455 802 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 TGM1P22735 817 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 TMOD1P28289 359 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 SLC11A1P49279 550 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 HTR4Q13639 388 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 COL9A3Q14050 684 aaPredicted RBP16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 LONRF3Q496Y0 759 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 CEP55Q53EZ4 464 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 NOMO2Q5JPE7 1267 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 MIS18BP1Q6P0N0 1132 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 GLB1LQ6UWU2 654 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 ZNF710Q8N1W2 664 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 ZBTB44Q8NCP5 570 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 SMG7Q92540 1137 aaKnown RBP16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 LPPQ93052 612 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 RHOBTB2Q9BYZ6 727 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 PARD6AQ9NPB6 346 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.155e-13■■□□□ 11.6
PPP4R1-206ENST00000577779 DNAJB4Q9UDY4 337 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 DPP7Q9UHL4 492 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 GMEB2Q9UKD1 530 aa16.01■□□□□ 0.15
PPP4R1-206ENST00000577779 INPP5FQ9Y2H2 1132 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms