RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 SEPT9Q9UHD8 586 aaPredicted RBP15.27■□□□□ 0.04
CUEDC1-203ENST00000577422 CDH22Q9UJ99 828 aa15.27■□□□□ 0.04
CUEDC1-203ENST00000577422 VAV3Q9UKW4 847 aa15.27■□□□□ 0.04
CUEDC1-203ENST00000577422 VPS13AQ96RL7 3174 aa15.27■□□□□ 0.03
CUEDC1-203ENST00000577422 A0A087WZ62 844 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 MEIS3P2A8K0S8 358 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 MAFO75444 373 aaPredicted RBP15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 EOMESO95936 686 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 PHKA2P46019 1235 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 ZXDAP98168 799 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 NHLH1Q02575 133 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 TRIM67Q6ZTA4 783 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 KSR1Q8IVT5 923 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 TRIM22Q8IYM9 498 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 NLRP7Q8WX94 980 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 ZNF558Q96NG5 402 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 FDXACB1Q9BRP7 624 aaPredicted RBP15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 PHF20Q9BVI0 1012 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 C22orf23Q9BZE7 217 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 KCNH6Q9H252 994 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 KCNMB3Q9NPA1 279 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 NGRNQ9NPE2 291 aaKnown RBP15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 KCNJ14Q9UNX9 436 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 CYP46A1Q9Y6A2 500 aa15.26■□□□□ 0.03
CUEDC1-203ENST00000577422 FSD2A1L4K1 749 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 C2orf71A6NGG8 1288 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 B4GALT3O60512 393 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 DTNBO60941 627 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 PPM1AP35813 382 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 TECP42680 631 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 SCRN1Q12765 414 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 STK3Q13188 491 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 INF2Q27J81 1249 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 ALYREFQ86V81 257 aaKnown RBP15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 FAM177A1Q8N128 213 aaPredicted RBP15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 MRPL43Q8N983 215 aaKnown RBP15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 LPPQ93052 612 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 RPGRIP1Q96KN7 1286 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 IFT122Q9HBG6 1241 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 ENTPD7Q9NQZ7 604 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 CHST12Q9NRB3 414 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 GJB4Q9NTQ9 266 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 SPG21Q9NZD8 308 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 KMT2EQ8IZD2 1858 aa15.25■□□□□ 0.03
CUEDC1-203ENST00000577422 NT5C1B-RDH14C9J2C7 533 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 BCAR1P56945 870 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 PPP2R5CQ13362 524 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 NONOQ15233 471 aaKnown RBP eCLIP15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 IER5LQ5T953 404 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 PLA2G4FQ68DD2 849 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 GALNT17Q6IS24 598 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 LLGL2Q6P1M3 1020 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 ABI1Q8IZP0 508 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 RNF169Q8NCN4 708 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 FEZF2Q8TBJ5 459 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 BCL7CQ8WUZ0 217 aaPredicted RBP15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 HAS1Q92839 578 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 ASIC4Q96FT7 647 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 GCOM2Q9BZD3 368 aaPredicted RBP15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 DACT1Q9NYF0 836 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 DDX25Q9UHL0 483 aaKnown RBP15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 PUF60Q9UHX1 559 aaKnown RBP15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 HCFC2Q9Y5Z7 792 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 CFAP54Q96N23 3096 aa15.24■□□□□ 0.03
CUEDC1-203ENST00000577422 TMEM221A6NGB7 291 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 M0R296 226 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 CTDNEP1O95476 244 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 NPEPPSP55786 919 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 PSMC5P62195 406 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 CDC42EP1Q00587 391 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 SPIRE1Q08AE8 756 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 PPP4R3AQ6IN85 833 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 TMC7Q7Z402 723 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 ZNF410Q86VK4 478 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 RHPN2Q8IUC4 686 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 PRSS33Q8NF86 280 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 OXER1Q8TDS5 423 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 MFSD14AQ96MC6 490 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 APOL5Q9BWW9 433 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 VN1R3Q9BXE9 311 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 MINDY3Q9H8M7 445 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 CYP26B1Q9NR63 512 aa15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 SUCLA2Q9P2R7 463 aaPredicted RBP15.23■□□□□ 0.03
CUEDC1-203ENST00000577422 DDX11L8A8MPP1 907 aa15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 CPLX1O14810 134 aa15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 CLASP2O75122 1294 aaKnown RBP15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 ZNF623O75123 536 aa15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 OFD1O75665 1012 aa15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 HOXB8P17481 243 aaPredicted RBP15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 AFF1P51825 1210 aaKnown RBP15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 KRT17Q04695 432 aa15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 SMC1AQ14683 1233 aaKnown RBP15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 LETM2Q2VYF4 491 aa15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 KRT25Q7Z3Z0 450 aa15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 SCLT1Q96NL6 688 aa15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 MRPL9Q9BYD2 267 aaKnown RBP15.22■□□□□ 0.03
CUEDC1-203ENST00000577422 DHX33Q9H6R0 707 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms