RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 SFI1A8K8P3 1242 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 GAS2O43903 313 aaKnown RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 PARNO95453 639 aaKnown RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 PFKMP08237 780 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 SRGAP2CP0DJJ0 459 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 GUCY2CP25092 1073 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 TMOD1P28289 359 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 CASP1P29466 404 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 ME1P48163 572 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 PTENP60484 403 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 MBTD1Q05BQ5 628 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 GIT2Q14161 759 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 DHX8Q14562 1220 aaKnown RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 CDCA2Q69YH5 1023 aaPredicted RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 ADALQ6DHV7 355 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 PSRC1Q6PGN9 363 aaPredicted RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 ZNF410Q86VK4 478 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 RPUSD2Q8IZ73 545 aaKnown RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 RNF149Q8NC42 400 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 PSPC1Q8WXF1 523 aaKnown RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 LARP4BQ92615 738 aaKnown RBP10.86□□□□□ -0.67
NDE1-212ENST00000577101 DNAJC19Q96DA6 116 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 CALML4Q96GE6 196 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 MAP7D2Q96T17 732 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 REEP2Q9BRK0 252 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 CCDC113Q9H0I3 377 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 ST3GAL5Q9UNP4 418 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 USP20Q9Y2K6 914 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 CEP290O15078 2479 aa10.86□□□□□ -0.67
NDE1-212ENST00000577101 TRIP11Q15643 1979 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 ENPP3O14638 875 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 ACTN4O43707 911 aaKnown RBP10.85□□□□□ -0.67
NDE1-212ENST00000577101 GADD45BO75293 160 aaPredicted RBP10.85□□□□□ -0.67
NDE1-212ENST00000577101 RPS6KA5O75582 802 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 RPLP2P05387 115 aaKnown RBP10.85□□□□□ -0.67
NDE1-212ENST00000577101 PFKFB1P16118 471 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 HOXA11P31270 313 aaPredicted RBP10.85□□□□□ -0.67
NDE1-212ENST00000577101 PBX2P40425 430 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 FAM102BQ5T8I3 360 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 RRAGBQ5VZM2 374 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 SPRED2Q7Z698 418 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 GPBP1Q86WP2 473 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 KCTD17Q8N5Z5 321 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 MCPH1Q8NEM0 835 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 TCP11Q8WWU5 503 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 NLRP7Q8WX94 980 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
NDE1-212ENST00000577101 JPH2Q9BR39 696 aaPredicted RBP10.85□□□□□ -0.67
NDE1-212ENST00000577101 FGFBP2Q9BYJ0 223 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 RNF19AQ9NV58 838 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 KBTBD4Q9NVX7 518 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 STK17AQ9UEE5 414 aa10.85□□□□□ -0.67
NDE1-212ENST00000577101 LAMA3Q16787 3333 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 LAMA2P24043 3122 aaKnown RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 M0QZ92 97 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 POLR2DO15514 142 aaKnown RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 B4GALT5O43286 388 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 BAIAP3O94812 1187 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 SSBP05455 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
NDE1-212ENST00000577101 MYOGP15173 224 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 ATF7P17544 494 aaPredicted RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 CMA1P23946 247 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 DNM2P50570 870 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 NDUFA8P51970 172 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 ZNF131P52739 623 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 RABGGTBP53611 331 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 POU5F1BQ06416 359 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 LRIT3Q3SXY7 679 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 HABP4Q5JVS0 413 aaKnown RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 UBXN11Q5T124 520 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 GRAMD1CQ8IYS0 662 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 USP38Q8NB14 1042 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 ENGASEQ8NFI3 743 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 SEPT8Q92599 483 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 DHX58Q96C10 678 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 LRCH3Q96II8 777 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 CDK5RAP3Q96JB5 506 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 NFKBIZQ9BYH8 718 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 SCAND2PQ9GZW5 306 aaPredicted RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 RC3H2Q9HBD1 1191 aaKnown RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 CCDC39Q9UFE4 941 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 SERTAD1Q9UHV2 236 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 YBX2Q9Y2T7 364 aaKnown RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 ATP6V1DQ9Y5K8 247 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 COL4A4P53420 1690 aaPredicted RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 ANK1P16157 1881 aa10.84□□□□□ -0.67
NDE1-212ENST00000577101 PDCD11Q14690 1871 aaKnown RBP10.84□□□□□ -0.67
NDE1-212ENST00000577101 RALGAPA2Q2PPJ7 1873 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 ABHD14A-ACY1A0A1B0GW23 586 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 A0A1W2PPC1 479 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 A0A1W2PQ27 194 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 A0A1W2PQ64 194 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 A0A1W2PQD8 194 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 FRMD3A2A2Y4 597 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 LCHNA4D1U4 455 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 MEIS3P2A8K0S8 358 aa10.83□□□□□ -0.68
NDE1-212ENST00000577101 C9IYK1 514 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms